| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0545 |
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| Symbol | |
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| ID | 6109453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 604599 |
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| End bp | 605555 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641620301 |
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| Product | formate dehydrogenase, beta subunit |
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| Protein accession | YP_001747419 |
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| Protein GI | 170719731 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.130453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCC AAGACATCAT CGCCCGCTCG GCCACCACCA CCGTACCGCC TTCGGTACGT
CAGCAGGAGG AAGTCGCCAA GTTGATCGAC ACCACCAAGT GCATCGGCTG CAAGGCCTGC
CAGGTGGCGT GTTCGGAGTG GAATGAACTG CGTGACGAGG TCGGCCACAA CCACGGTACC
TACGACAATC CCCAGGACCT GACGGCCGAT ACCTGGACCC TGATGCGCTT TACCGAACAC
GAGCGCGACG ACGGCAACCT GGAGTGGCTG ATCCGCAAGG ACGGCTGCAT GCATTGCGCC
GAGCCGGGTT GCCTGAAGGC CTGCCCGAGC CCGGGTGCGA TCATCAAGCA CGCTAACGGC
ATCGTCGATT TCAACCAGGA CCATTGCATC GGCTGTGGCT ACTGCATCAC TGGCTGCCCG
TTCAACATTC CGCGCATCTC GCAGAAAGAC CACAAGGCCT ACAAGTGCTC GCTGTGTTCC
GACCGCGTGA GCGTGGGCCT GGAGCCTGCC TGCGTGAAAA CCTGCCCGAC CGGCGCGATC
GTCTTCGGCA GCAAGGACGA AATGAAGGTG CATGCTGCCG AACGCATCGT CGACCTCAAA
TCGCGTGGCT ACGACAACGC CGGTCTCTAC GACCCGGACG GCGTCGGTGG CACGCACGTG
ATGTATGTAC TGCACCATGC CGATACGCCC AGGCTGTATG CCGGTCTGCC GGACCAGCCG
GTGATCAGCC CGCTGGTGGG CTTGTGGAAG GGCATCACCA AGCCGCTGGC GCTGCTGGCG
ATGGGCGCGG CGGTGCTGGC GGGGTTCTTC CACTATGTGC GGGTTGGCCC GCAGCGGGTC
GAGGAGGACG AACACCCCAC CACCACGCCA CCTGATGACA GCGTGCACCA GGTGGACCCG
GCGGTGCATG TCTACGATCC GAAGCAGCCC GGTGGGCAAG GGGAGCAGCG GCCATGA
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| Protein sequence | MASQDIIARS ATTTVPPSVR QQEEVAKLID TTKCIGCKAC QVACSEWNEL RDEVGHNHGT
YDNPQDLTAD TWTLMRFTEH ERDDGNLEWL IRKDGCMHCA EPGCLKACPS PGAIIKHANG
IVDFNQDHCI GCGYCITGCP FNIPRISQKD HKAYKCSLCS DRVSVGLEPA CVKTCPTGAI
VFGSKDEMKV HAAERIVDLK SRGYDNAGLY DPDGVGGTHV MYVLHHADTP RLYAGLPDQP
VISPLVGLWK GITKPLALLA MGAAVLAGFF HYVRVGPQRV EEDEHPTTTP PDDSVHQVDP
AVHVYDPKQP GGQGEQRP
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