| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0544 |
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| Symbol | |
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| ID | 6109452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 602170 |
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| End bp | 604599 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620300 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001747418 |
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| Protein GI | 170719730 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0932731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC ATTGGTCAGA TATCGCCAAC GCGAATCTGG TCCTGGTGAT GGGTGGCAAC
GCAGCAGAAG CGCACCCGTG CGGCTTCAAG TGGGTGACCG AGGCCAAGGC GCACAACAAG
GCGCGGCTGA TCGTGGTCGA CCCGCGGTTT ACCCGTACCG CCTCGGTGGC GGACTACTAC
GCGCCAATTC GTACCGGCAG CGACATCGCC TTCATGGGCG GGTTGATCAA CTACCTGCTG
AGCAATGACA AGATCCAGCA CGAGTACGTG CGCAACTACA CCGACGTTTC GTTCATCGTC
AAAGAAACCT ATGGTTTCGA AGACGGGCTG TTCAGTGGCT ACGACGCGGC CAAGCGCGTG
TATGCCGACA AGTCCGGCTG GGGTTACGAA CTGGGCGAGG ACGGCTTCGC CAAGGTCGAC
CCGACCCTGC AGCACCCGCG TTGCGTGTTC CAGCTGATGA AGCAGCATTA CAGCCGCTAC
ACCCCCGAAC TGGCGAGCAT GACCTGTGGC ATGCCGCAGG ACGCCATGAT GAAGATCTGG
GAAGAGATCG CCACCTGCTC GGTACCGGGC AAGACCATGA CGATCCTCTA TGCACTGGGC
TGGACGCAGC ATTCGATCGG CGCGCAGATC ATCCGCAGTG CCGCCATGGT CCAGTTGCTG
CTGGGCAACG TCGGCATGCC GGGTGGCGGG GTCAATGCCC TGCGCGGGCA TTCCAACATC
CAGGGCCTGA CCGACCTTGG TTTGCTGTCC AACTCGCTAC CGGGCTATTT GAGCCTGCCA
GGGGATGCCG AGCAGGACTA TGCCGCCTAC ATTGACAAGC GGGCCTCCAA GCCGCTGCGC
CCTGGGCAGC TGTCCTACTG GCAGAACTAC GGCAAGTTCC ATGTCAGCCT GATGAAGGCC
TGGTATGGCG CCAATGCCAC GGCAGAAAAC AACTGGGGCT ACGACTGGTT GCCCAAGCTC
GATGTGCCGG CCTATGACGT GCTGCGCATG TTCGAGATGA TGAGCCAAGG CAAGGTCAAC
GGTTACTTCT GCCAAGGCTT CAACCCGATC GCCGCGTTGC CGGACAAGAA CCGCGTGACC
GCTGCCCTGG GCAAGCTCAA GTGGCTGGTG GTCATGGACC CGCTGGCCAC CGAGACCTCG
GAGTTCTGGC GCAATGCCGG GCCCTTTAAC GATGTCGACA CGGCCAATAT CCAGACCGAA
GTGATCCGCC TGCCCACCAC CTGTTTCGCC GAGGAGGATG GTTCGCTGGT CAACAGCAGC
CGCTGGCTGC AGTGGCACTG GAAGGGCGCT GACGGCCCGG GCGAGACCCG CACCGACGTG
CAGATCATGA GCGAGTTGTT CCTGCGCATG CGTCAGCGCT ATCAGACAGA GGGTGGCACT
TACCCTGATC CGATCATGAA CATTAGTTGG CCCTACAAGC TGCCTGACGA GCCGTCCCCG
GAGGAACTGG CCAAGGAAAT GAACGGCTGG GCGGTCACTG ATGTGACCGA CCCCACCGGC
GCGCTCATCA AGGCCGGGCA ACAGTTGGCA GGCTTCGGCC AGCTCAAGGA CGACGGCAGC
ACTGCGTCCG GCTGCTGGAT CTTCGCCGGT TGCTGGACCG AGCAGGGCAA CCAGATGGCG
CGGCGCGACA ACAGCGACCC GTACGGCATG CACCAGGCGC AGAACTGGGC CTGGGCCTGG
CCGGCCAACC GCCGCATCCT TTACAACCGT GCCTCCAGCG ACCTGCAAGG CAAGCCATGG
GACCCGGAGA AAAAGCGCCT GGTATGGTGG AACGGCAAGG CCTGGACAGG CACCGACGTG
CCCGACTTCA AGGTCGACTC GCCACCGGAA GCGGGCATGA ACCCGTTCAT CATGAACCCC
GAGGGCGTGG CGCGGTTTTT TGCCATCGAC AAGATGGCCG AAGGGCCGTT CCCCGAGCAC
TACGAGCCGT TCGAGACACC GATCGGCATC AACCCGCTGC ACCCGAAGAA CAACAAGGCC
ACCAGCAACC CGGCCGGGCG GATCTTCGAT TCGGTGTGGG ACACCCTCGG CAAGCACGAC
GAATTCCCCT ATGCGGCTAC GACGTATCGG CTGACCGAGC ACTTCCACTT CTGGAGCAAG
CATTGCCGGC TCAACGCCAT TGCCCAGCCC GAGCAGTTCG TCGAGATCGG TGAGGTGCTG
GCCAACGAGA AAGGCATCAA GGCGGGGGAC CGGGTGCGGG TATCGAGCAA GCGCGGGCAT
ATCGAAGCGG TGGCGGTGGT GACCAAGCGG ATTCGCCCGT TGCAGGTCAA CAACCAGACC
GTGCACCAGA TCGGCATTCC TTTGCACTGG GGCTTCACCG GCGCGACACG GCACGGTTAC
CTGACCAACA CCTTGGTGCC CTTCCTCGGT GACGGCAACA CGCAAACGCC GGAGTCCAAG
TCGTTCCTCG TCAAAGTGGA GAAACTCTGA
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| Protein sequence | MTNHWSDIAN ANLVLVMGGN AAEAHPCGFK WVTEAKAHNK ARLIVVDPRF TRTASVADYY
APIRTGSDIA FMGGLINYLL SNDKIQHEYV RNYTDVSFIV KETYGFEDGL FSGYDAAKRV
YADKSGWGYE LGEDGFAKVD PTLQHPRCVF QLMKQHYSRY TPELASMTCG MPQDAMMKIW
EEIATCSVPG KTMTILYALG WTQHSIGAQI IRSAAMVQLL LGNVGMPGGG VNALRGHSNI
QGLTDLGLLS NSLPGYLSLP GDAEQDYAAY IDKRASKPLR PGQLSYWQNY GKFHVSLMKA
WYGANATAEN NWGYDWLPKL DVPAYDVLRM FEMMSQGKVN GYFCQGFNPI AALPDKNRVT
AALGKLKWLV VMDPLATETS EFWRNAGPFN DVDTANIQTE VIRLPTTCFA EEDGSLVNSS
RWLQWHWKGA DGPGETRTDV QIMSELFLRM RQRYQTEGGT YPDPIMNISW PYKLPDEPSP
EELAKEMNGW AVTDVTDPTG ALIKAGQQLA GFGQLKDDGS TASGCWIFAG CWTEQGNQMA
RRDNSDPYGM HQAQNWAWAW PANRRILYNR ASSDLQGKPW DPEKKRLVWW NGKAWTGTDV
PDFKVDSPPE AGMNPFIMNP EGVARFFAID KMAEGPFPEH YEPFETPIGI NPLHPKNNKA
TSNPAGRIFD SVWDTLGKHD EFPYAATTYR LTEHFHFWSK HCRLNAIAQP EQFVEIGEVL
ANEKGIKAGD RVRVSSKRGH IEAVAVVTKR IRPLQVNNQT VHQIGIPLHW GFTGATRHGY
LTNTLVPFLG DGNTQTPESK SFLVKVEKL
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