| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0541 |
|---|
| Symbol | |
|---|
| ID | 6109449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 599830 |
|---|
| End bp | 600615 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641620297 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001747415 |
|---|
| Protein GI | 170719727 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.71151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0781963 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGT TAGGCGCTTA CTGGGCGGAA CACTGGCTGC TGGCGATCCT GCTACTGGGC
GCAATTGCCT TTGTCGCGGG CTTCGTGGAC AGCATTGCCG GTGGGGGCGG GTTGTTCCTG
GTACCAGGGT TTCTGCTGGT GGGCATGCCG CCTCAGGTAG CCCTGGGGCA GGAAAAACTG
GTCAGTACGC TGGGCACGCT GGCTGCCATC CGCAACTTCC TGGCCAACAG CAAGATGGTC
TGGCAGGTGG CGCTGGTAGG CGTGCCTTTC TCACTACTCG GCGCCTACCT GGGGGCGCAC
CTGATCGTGT CGATCTCTCA GGAAACCGTA GGCAAGATCA TTCTGGCGTT GATCCCTTTC
GGCATCCTCA TCTTCCTCAC CCCCAAAGAC CGCCCGATAG AGGAGCGAGA GCTGTCGGCG
CGGATGCTCT ACACCGTCGT GCCGTTGACC TGCCTGGCCA TCGGTTTTTA CGACGGCTTC
TTCGGCCCAG GTACTGGCAG CATGTTCATC ATCGCCTTCC ACTACCTGCT GCGCATGGAC
CTGGTTTCCA GTTCGGCCAA CTCCAAGACC TTCAACTTCG CCTCCAACAT CGGTGCGCTG
GTCGCATTCA TCATGGCCGG CAAGGTGGTC TACCTGCTGG CGCTACCGCT GGTGGCCTGC
AACATCCTCG GCAATCACAT GGGCAGTGCA CTGGCACTGC GCAAAGGCAA CGACGTGGTG
CGCAAGGCGC TGGTGTTTTC GATGCTGTGC CTGTTCACCA GCCTTGGCGT GAAGTACCTG
GTCTGA
|
|---|
| Protein sequence | MELLGAYWAE HWLLAILLLG AIAFVAGFVD SIAGGGGLFL VPGFLLVGMP PQVALGQEKL
VSTLGTLAAI RNFLANSKMV WQVALVGVPF SLLGAYLGAH LIVSISQETV GKIILALIPF
GILIFLTPKD RPIEERELSA RMLYTVVPLT CLAIGFYDGF FGPGTGSMFI IAFHYLLRMD
LVSSSANSKT FNFASNIGAL VAFIMAGKVV YLLALPLVAC NILGNHMGSA LALRKGNDVV
RKALVFSMLC LFTSLGVKYL V
|
|---|
| |