| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0538 |
|---|
| Symbol | |
|---|
| ID | 6109446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 595607 |
|---|
| End bp | 596878 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641620294 |
|---|
| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| Protein accession | YP_001747412 |
|---|
| Protein GI | 170719724 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.789432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0511998 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAA CTCTCTATAC CCTGTTGTTC CACCTGGGCC TGCCGCTGGT CGCGCTGCGC
CTTTACCTGC GTGCCCGCAA GGCCCCGGCC TACGGCCAGC GTATCGGCGA ACGTTTCGCC
CGCAACCTGC CGGCGATGCG CCAAGGTGGC ATCTGGGTAC ATGCCGTATC GGTAGGTGAA
AGCATTGCCG CGGCGCCCAT GGTGCGAGCT TTGCTCAAGG CCTACCCGGA CCTGCCGGTC
ACGCTCACCT GCATGACGCC CACCGGCTCA GAGCGCATTC GCGCGCTGTT CGCCGATGAA
CCACGCATCC AGCATTGCTA CCTGCCTTAT GACCTGCCGT GGGCGGCGGG GCGTTTTCTC
GACCATGTGC GCCCGCGGCT GGGCATCATC ATGGAAACCG AGCTGTGGCC CAACCATATT
CACCAATGCG CCAAGCGTGG CATTCCGGTT GCGCTGGCCA ATGCTCGGTT GTCCGAGCGT
TCCGCCCGTG GCTATGCGCG TTTTGCCAGT CTGACCCGGC CGATGCTCGC CGAGATGAAC
CTGATTGCGG TGCAGACCGA AACCGAGGCG CAACGCTTCC GCGACTTGGG TGCGCGTCCT
GAGTGCGTGC AGGTCACAGG TTCGATCAAG TTCGACCTGA AGGTCGATGA CCAGCTTTTG
CCGCGTGCCA GGGCACTGCG TGAACAGTGG GGCGCCAGCG GGAGGCCGGT GTGGATTGCG
GCCAGTACCC ATGAGGGTGA GGACGCGCTG ATCCTGCAGG CTCATCAGCA GTTGCTGCAG
GTGCATGGCG ACGCGCTGCT GATCCTGGTG CCGCGCCACC CCGAGCGTTT CGATGCAGTG
CATGCCTTGT GCAGCGGGCA GTTCGCTACC GTGCGCCGTT CTGCCGGTGC GGCGGTCGAT
GGCCAGACCC GCGTGCTGCT CGGCGATACC ATGGGCGAGC TGCTGTTCCT CTACGCACTG
GCCGACATCG CCTTCGTCGG CGGCAGCCTG GTCGCCACTG GCGGCCACAA CCCACTGGAG
CCGGCAGCGC TGGCGCTGCC GGTGATCATG GGGCCGCATG TGTTCAACTT CCTCGAAATC
AGCGCGATGT TGCGTGATGC CGGGGCGTTG CAGCAGGTGG ACGATGCCCA AGGGTTGGCA
GAGGCAGTGC GGCAGTTGAT CGAGTTGCCG CAGGATGCCC AGCGCATGGG TGAGGCGGGC
AGGGCGGTGA TGCAGGCCAA TCAGGGGGCC TTGCAGCGGT TGCTGGATGG GCTGGGGCGG
TTGATCCGCT GA
|
|---|
| Protein sequence | MNRTLYTLLF HLGLPLVALR LYLRARKAPA YGQRIGERFA RNLPAMRQGG IWVHAVSVGE
SIAAAPMVRA LLKAYPDLPV TLTCMTPTGS ERIRALFADE PRIQHCYLPY DLPWAAGRFL
DHVRPRLGII METELWPNHI HQCAKRGIPV ALANARLSER SARGYARFAS LTRPMLAEMN
LIAVQTETEA QRFRDLGARP ECVQVTGSIK FDLKVDDQLL PRARALREQW GASGRPVWIA
ASTHEGEDAL ILQAHQQLLQ VHGDALLILV PRHPERFDAV HALCSGQFAT VRRSAGAAVD
GQTRVLLGDT MGELLFLYAL ADIAFVGGSL VATGGHNPLE PAALALPVIM GPHVFNFLEI
SAMLRDAGAL QQVDDAQGLA EAVRQLIELP QDAQRMGEAG RAVMQANQGA LQRLLDGLGR
LIR
|
|---|
| |