| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0531 |
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| Symbol | |
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| ID | 6109439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 587810 |
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| End bp | 589621 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620287 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_001747405 |
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| Protein GI | 170719717 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.140782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCCG AAACACCGCT ACCGGCGGAG CACACCTCCA GCCTGAAGAT CTACTTCCGG
TTGCTGAGCT ACGTGAAACC CTATATCGGC ATTTTCCTGC TGAGTATTGT CGGTTTCGTG
ATCTTTGCCT CGACCCAGCC AATGCTGGCC GGGATCCTCA AGTACTTTGT CGATGGCCTG
AGCAACCCCG AAGCGGTGTT GTTCCCCAAC GTCCCCTACT TGCGCGACCT GCAATTGCTG
CAGGCGGTAC CGCTGCTGAT CATCCTGATC GCCGCGTGGC AAGGCCTGGG TTCGTTCCTC
GGCAACTACT TCCTGGCCAA GGTTTCCCTT TCCCTGGTGC ATGACCTGCG TGTGGAGTTG
TTTAACAAGC TGCTGGTACT GCCCAACCGC TATTTCGACA ATCACAACTC CGGGCACCTG
ATTTCACGCA TTACCTTCAA CGTGACCATG GTGACGGGTG CCGCCACCGA TGCAATCAAG
GTGGTGATCC GTGAAGGCCT GACCGTGGTG TTCCTGTTTG CCTACCTGCT TTGGATGAAC
TGGCACCTGA CCCTGGTAAT GGTCGCCATC CTGCCGGTGA TCGCGGTAAT GGTCAGCGTC
GCCAGCAAGA AATTCCGTAA ACAGAGCAAG AAGATCCAGG TGGCCATGGG CGACGTGACC
CACGTAGCTT CCGAAACCAT CCAGGGCTAC CGTGTGGTTC GCAGCTTCGG CGGTGAGGCT
TACGAGCAGC AGCGCTTTGG CCGTGCCAGC CAGAGCAACA CCGACAAACA GCTGCGCATG
ACCAAGACTG GCGCCCTGTA CACGCCGATG CTGCAACTGG TGATCTACAG CGCCATGGCC
GCGTTGATGT TCCTGGTGCT GTTCCTGCGG GGCGACTCGA CCGCCGGTGA TCTGGTGGCC
TACATCACCG CCGCAGGCTT GCTGCCAAAG CCGATCCGCC AGCTTTCAGA GGTCAGTTCG
ACCATCCAGA AAGGCCTGGC CGGGGCTGAA AGCATCTTCG AGCAGCTCGA CGAGCAGCCC
GAGATCGACC GCGGTACGAT CGAGAAGGAG CGGGTGGCAG GTCGCCTCGA AGTACGCAAC
CTGAGCTTCA CCTACCCAGG CACCGAGCGC GAAGTGCTGA GCGACATCAG CTTTACCGCC
GAGCCTGGGC AGATGATCGC GCTGGTCGGG CGCTCTGGTA GCGGCAAGTC GACCCTGGCG
GCGCTGATCC CGCGCTTCTA TCACCACGAT CAGGGGCAGA TTCTGCTCGA TGGCGTGGAG
ATCGAAGACT ACCGCCTGCG CAACCTGCGC CGGCACGTTT CGCAGGTGAC CCAGCATGTG
ACCCTGTTCA ACGACACAGT GGCCAACAAC ATTGCCTACG GCGACCTGGC CGGCGCGCCG
CGCGCAGACA TCGAAGCTGC GGCTGCCGAT GCCTATGCCA AGGAGTTCGT CGACCAGTTG
CCCAAGGGCT TTGACACCGA CGTGGGCGAA AACGGCGTGC TGCTGTCCGG TGGCCAGCGC
CAGCGCCTGG CGATTGCCAG GGCTCTGTTG AAGAACGCGC CGCTGCTGAT CCTCGACGAA
GCAACTTCGG CACTGGACAC TGAGTCCGAG CGGCATATCC AGGCTGCTCT GGACCATGTC
ATGCAGGGCC GCACCACGCT GGTGATCGCG CACCGCCTGT CCACAATCGA GAAAGCCGAC
CAGATCCTGG TGATGGACCA GGGCCGCCTG GTGGAGCGCG GTACCCATGC CGAGCTGCTG
GCGGCCAATG GCTATTATGC CCGCTTGCAC GCCATGGGCC TGGAAGAGCC GGCGAAGGCC
GATATCACCT GA
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| Protein sequence | MMAETPLPAE HTSSLKIYFR LLSYVKPYIG IFLLSIVGFV IFASTQPMLA GILKYFVDGL
SNPEAVLFPN VPYLRDLQLL QAVPLLIILI AAWQGLGSFL GNYFLAKVSL SLVHDLRVEL
FNKLLVLPNR YFDNHNSGHL ISRITFNVTM VTGAATDAIK VVIREGLTVV FLFAYLLWMN
WHLTLVMVAI LPVIAVMVSV ASKKFRKQSK KIQVAMGDVT HVASETIQGY RVVRSFGGEA
YEQQRFGRAS QSNTDKQLRM TKTGALYTPM LQLVIYSAMA ALMFLVLFLR GDSTAGDLVA
YITAAGLLPK PIRQLSEVSS TIQKGLAGAE SIFEQLDEQP EIDRGTIEKE RVAGRLEVRN
LSFTYPGTER EVLSDISFTA EPGQMIALVG RSGSGKSTLA ALIPRFYHHD QGQILLDGVE
IEDYRLRNLR RHVSQVTQHV TLFNDTVANN IAYGDLAGAP RADIEAAAAD AYAKEFVDQL
PKGFDTDVGE NGVLLSGGQR QRLAIARALL KNAPLLILDE ATSALDTESE RHIQAALDHV
MQGRTTLVIA HRLSTIEKAD QILVMDQGRL VERGTHAELL AANGYYARLH AMGLEEPAKA
DIT
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