| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0527 |
|---|
| Symbol | |
|---|
| ID | 6109435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 583672 |
|---|
| End bp | 585075 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641620283 |
|---|
| Product | LmbE family protein |
|---|
| Protein accession | YP_001747401 |
|---|
| Protein GI | 170719713 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.860453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.132205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGCA AACAACAGTT GCTCAAGCGC CACCGGCGCA ACAAGCGCTT GGGGCTACTG
GGCGGCCTGG CGGTGCTGGT TGCCGTGGGC GTATTCGCCT GGTGGTGGCT GCCGTTGTTG
CTGCTGCCGC TGCTCTGGGC TGCCCACGAA GCTTGGTTCG CTGATCATCT GTTCTATGCA
CCGGGCGAAG ATTACGCCTA CAACTTCGGC GAGCAGACCG GCGAAGCGCC TGTCACCTTG
CGTGACGGCG TGCTCAAGGT CGATAAGGCG CTGCAGGGTA ATGAAACGCT GATCCTCGAA
GTGCGGGTAA AAAGCGGATG GCTGGGGCGT TTTCTCGACC CGTGTGTCGA GCTGCTGGCC
GATGAGCGTG CTGACCGGCA GACGTTCGAG CGCGGTGTCG ACGGCGTTCG CTTCCTGAAC
CTTACCGGGC TGGCTGCACC GCTGCAGGCG GGTACGCTGC TCGTGTGCGG CCGTCACTGT
CGACTGCAGG GCCAGCCGCG GCTGTGGATA ACCCCCGGCG TAGAAATGCA GCGCCGTCGC
GTGATGGTGA TAGCGCCACA TGCCGATGAT GCCGAGCTGG CGGCCTATGG CCTTTACAGC
CAGGCGGACG AAGCCTGGGT GGTGACCTTG ACCGCTGGCG AAATCGAAGC AGAACACTAC
CAGCAGATGG GCATGGGCAA GGCCGAGGCA GCACGGCTGA AGGGCCGTCT GCGTGCCTGG
GACAGTATTG CCGTGCCGCG CTGGGCCGGG GTGCCAGAGG CGCGTTGTGT GCAATTAGGC
TACTTTTGCC TGCAGCTGCC CGCCATGCAG GCAGCGCCCG ATGTGCCGGC CGGTTCCCGA
GAAGCCGACA TGGTCGATAT TCGCCCGTTC CGTCGCTTCA ACCCGTTGTC GTTGCCGGCC
GACAGCGATG GCGCGCCAAC CTGGAACAAC CTGCTGGCTG ACCTGCGTGC GCTGTTGGAG
ATGGCCCGGC CTGAAGTGCT GGTGATGCCG CATCCGCAAC TGGACCCGCA CCCTGATCAC
ATCTGCGCCC ATATGGCCGT CATGCAGGCA CTGCGGGGCT TGGTGTGGCA GCCGCAGACG
CTGCTGTGCT ATGCCAACCA TCTGCACGAC AACGATCGCT GGCCCATGGG CGACAGCGGC
GATGGGGTGG CCTTGCCACC GCAACTGAGT GCCGACCAGC CGTGGGCACC CTGCAGCCTG
GTGCTGGACC TGCCGACGCA GCGTGACAAG GCGATGGCCC TGGGCATGAT GCACGACCTG
CAACCTGCCG CGCCGTTCAA GCGCCGATTG CGTCGGCTGT TGCAGCGCTG GCTGGCCGGG
CGCCGGCCAT CGCCCTACGG TGAGAACGAG TTCTTCCGCA AGGCCGTGCG CCGCCATGAA
CTGTTCTGGC GCCGTGAGCT GTAG
|
|---|
| Protein sequence | MSRKQQLLKR HRRNKRLGLL GGLAVLVAVG VFAWWWLPLL LLPLLWAAHE AWFADHLFYA
PGEDYAYNFG EQTGEAPVTL RDGVLKVDKA LQGNETLILE VRVKSGWLGR FLDPCVELLA
DERADRQTFE RGVDGVRFLN LTGLAAPLQA GTLLVCGRHC RLQGQPRLWI TPGVEMQRRR
VMVIAPHADD AELAAYGLYS QADEAWVVTL TAGEIEAEHY QQMGMGKAEA ARLKGRLRAW
DSIAVPRWAG VPEARCVQLG YFCLQLPAMQ AAPDVPAGSR EADMVDIRPF RRFNPLSLPA
DSDGAPTWNN LLADLRALLE MARPEVLVMP HPQLDPHPDH ICAHMAVMQA LRGLVWQPQT
LLCYANHLHD NDRWPMGDSG DGVALPPQLS ADQPWAPCSL VLDLPTQRDK AMALGMMHDL
QPAAPFKRRL RRLLQRWLAG RRPSPYGENE FFRKAVRRHE LFWRREL
|
|---|
| |