| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0522 |
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| Symbol | |
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| ID | 6109430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 577279 |
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| End bp | 578757 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620278 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001747396 |
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| Protein GI | 170719708 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.550728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0854838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAATC CACTAACGAT CACTTTCGTG ATCTATATCG CGGTAATGGT ACTGATCGGC
TTCGCCGCCT ATCGCTCCAC CAAGAACCTT TCCGATTACA TTCTGGGCGG CCGCAGCCTG
GGTAGCGTTG TCACCGCGCT TTCCGCTGGT GCTTCCGACA TGAGCGGCTG GCTGCTGATG
GGCCTGCCGG GCGCCATCTA CTTTTCAGGC CTGTCCGAGG CCTGGATCGC CATCGGCCTG
ACCGTCGGTG CCTACCTCAA CTGGCTGTTC GTCGCTGGCC GTCTGCGCGT GCAGACCGAG
CACAACGGCG ATGCGCTGAC CCTGCCGGAC TACTTCTCCA GCCGCTTCGA AGACAGCAGC
GGCCTGCTGC GGATCATTTC GGCCATCGTC ATCCTGGTGT TCTTCACCAT CTATTGCGCC
TCCGGTATCG TCGCCGGCGC CCGCCTGTTC GAAAGTACCT TCGGCATGTC GTACGAGACT
GCGCTGTGGG CCGGTGCTGC GGCTACCATC GCCTACACCT TCATCGGTGG CTTCCTGGCG
GTGAGCTGGA CAGACACCGT GCAGGCCTCG CTGATGATCT TCGCGCTGAT CCTGACCCCG
ATCATCGTGC TGATCTCCAC GGGCGGCTTC GACACGACCT TCCTGGCCAT CGAAGCGCAG
AACCCGGCGC ACTTCGACAT GCTCAAGGGC GCGACCTTCA TCGGCATCAT TTCGCTGATG
GGCTGGGGCC TGGGCTACTT CGGTCAGCCG CACATCCTGG CGCGCTTCAT GGCCGCTGAT
TCGGTCAAAT CGATCGCCAA CGCCCGCCGC ATCTCCATGA CCTGGATGAT CCTGTGCCTG
GTCGGTACCT GCGCCGTGGG CTTCTTCGGT ATCGCTTATT TCTCCGCTCA CCCTGAGCTG
GCCGGCCCGG TCACCGAGAA CCACGAGCGT GTGTTCATCG AGCTGGCGAA GATCCTGTTC
AACCCTTGGG TAGCCGGTGT GCTGCTGTCG GCCATTCTGG CCGCGGTGAT GAGTACCTTG
AGCTGCCAGT TGCTGGTGTG CTCCAGTGCG CTGACCGAAG ACTTCTACAA GGCCTTCCTG
CGCAAGAATG CCTCGCAGCG TGAATTGGTC TGGGTCGGTC GCCTGATGGT GCTGGCCGTG
GCCCTGATCG CCATCGCCAT GGCTGCCAAT CCGGAAAACC GCGTGCTGGG CCTGGTGGCC
TACGCCTGGG CCGGCTTTGG TGCCGCCTTC GGTCCGGTCG TGTTGATCTC GGTGCTGTGG
AAAGGCATGA CCCGTAACGG CGCGCTGGCC GGTATCGTGG TCGGTGCACT GACCGTGATC
CTTTGGAAAC AGTTCGACAC CATCGGGTTG TACGAAATCA TCCCGGGCTT CCTGTTCGCC
AGCATCGCCA TCGTCGTGGT GAGCAAGCTC GGCAGCCCGT CGAACAGCAT GGTTTCGCGC
TTTGAAACCG CTGATGCCGC GTATCACGCT GAAAAGTAA
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| Protein sequence | MGNPLTITFV IYIAVMVLIG FAAYRSTKNL SDYILGGRSL GSVVTALSAG ASDMSGWLLM
GLPGAIYFSG LSEAWIAIGL TVGAYLNWLF VAGRLRVQTE HNGDALTLPD YFSSRFEDSS
GLLRIISAIV ILVFFTIYCA SGIVAGARLF ESTFGMSYET ALWAGAAATI AYTFIGGFLA
VSWTDTVQAS LMIFALILTP IIVLISTGGF DTTFLAIEAQ NPAHFDMLKG ATFIGIISLM
GWGLGYFGQP HILARFMAAD SVKSIANARR ISMTWMILCL VGTCAVGFFG IAYFSAHPEL
AGPVTENHER VFIELAKILF NPWVAGVLLS AILAAVMSTL SCQLLVCSSA LTEDFYKAFL
RKNASQRELV WVGRLMVLAV ALIAIAMAAN PENRVLGLVA YAWAGFGAAF GPVVLISVLW
KGMTRNGALA GIVVGALTVI LWKQFDTIGL YEIIPGFLFA SIAIVVVSKL GSPSNSMVSR
FETADAAYHA EK
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