Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0513 |
Symbol | |
ID | 6109421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 562469 |
End bp | 563854 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641620269 |
Product | ATP-dependent RNA helicase DbpA |
Protein accession | YP_001747387 |
Protein GI | 170719699 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.227206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.370173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACCG AAACCACCGC TTTTGCCACC TTGCCGCTGT CCGCCGCCAT GCTGGCCAAC CTGGACGCCC TCGGCTATGC CTCGATGACG CCGATCCAGG CCCAGAGCCT GCCCGTCATC CTCAGGGGCC AGGACCTGAT TGCCCAGGCC AAGACCGGCA GCGGCAAGAC CGCCGCCTTC GGCATCGGCC TGCTCAACCC GATCAACCCG CGCTACTTCG GTTGCCAGGC ACTGGTACTG TGCCCCACCC GCGAGCTTGC CGACCAGGTT GCCAAAGAGC TGCGCCGCCT GGCCCGCGCC GAAGACAACA TCAAGATCCT CACCCTGTGC GGTGGCGTCT CGCTTGGCCC GCAGATCGCT TCGCTGGAGC ATGGCGCGCA CATCATCGTC GGCACCCCAG GGCGCATCCA GCAACACCTG GACAAAGGCA CCCTGGTGCT CGACGGGCTC AATACCCTGG TGCTGGACGA AGCCGACCGT ATGCTCGACA TGGGCTTTTT CGACGCTATC GCCAGCATCA TCGGCAAGAC CCCGTCGCGC CGCCAGACCC TGCTGTTCTC GGCCACTTAC CCCGCCGGTA TCGAGCAACT GGCCGCCGAC TTCATGCGCA AGCCGCAGCA GGTCAAGGTC GAGAGCCTGC ACACCGACAA CCAGATCGAA CAGCGCTTCA TCGAGATCGA CCCGCAACAG CGCCTGGAGG CCGTCACCCG CGTGCTCGGC CACTACCGCC CGCAGTCCTG CGTGGCGTTC TGCTTCACCA AGCAGCAGTG CGAGGACGTG GTTGCCCACC TCACCGCCAA GGGCATCGTG GCCCAGGCCC TGCACGGCGA CCTCGAGCAG CGCGACCGCG ACCAGGTGCT GACCATGTTC GCCAACCGCA GCAGTTCGGT GCTGGTGGCC ACTGATGTGG CCGCACGCGG TCTGGATATC GATGGCCTGG ACATGGTCAT CAACGTGGAG CTGGCGCGCG ATGCCGAGAT CCACGTGCAC CGCGTCGGCC GTACCGGTCG GGCGGGCGAG AAAGGCATTG CCGTGAGCCT GGTCGCTCCG GCTGAAGGCC ATCGCGCCCA GGCCATCGAG GCGCTGCAGA AGAGTCCGCT GCGCTGGGAC CAGCTGGACA GCCTGAAGAA CAAAGGTGGC GAACTGCTGC TGCCGGTCAT GACCACGCTA TGCATCGCCG CTGGTCGCAA GGACAAGCTG CGCCCGGGAG ACATCCTGGG TGCGCTGACC GGTGATGCCG GCATCCCGGG CAAGCAGGTG GGCAAGATCG CCATCTTCGA CTTCCAGGCC TTCGTGGCGG TGGAGCGGGC CCTGGCCAAG CAGGCGATGC AGCGCCTGAA CAGCGGCAAG ATCAAGGGCC GCGCCCTGAA AGTTCGCATT CTCTGA
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Protein sequence | MTTETTAFAT LPLSAAMLAN LDALGYASMT PIQAQSLPVI LRGQDLIAQA KTGSGKTAAF GIGLLNPINP RYFGCQALVL CPTRELADQV AKELRRLARA EDNIKILTLC GGVSLGPQIA SLEHGAHIIV GTPGRIQQHL DKGTLVLDGL NTLVLDEADR MLDMGFFDAI ASIIGKTPSR RQTLLFSATY PAGIEQLAAD FMRKPQQVKV ESLHTDNQIE QRFIEIDPQQ RLEAVTRVLG HYRPQSCVAF CFTKQQCEDV VAHLTAKGIV AQALHGDLEQ RDRDQVLTMF ANRSSSVLVA TDVAARGLDI DGLDMVINVE LARDAEIHVH RVGRTGRAGE KGIAVSLVAP AEGHRAQAIE ALQKSPLRWD QLDSLKNKGG ELLLPVMTTL CIAAGRKDKL RPGDILGALT GDAGIPGKQV GKIAIFDFQA FVAVERALAK QAMQRLNSGK IKGRALKVRI L
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