Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0510 |
Symbol | |
ID | 6109418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 558126 |
End bp | 558863 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641620266 |
Product | extracellular solute-binding protein |
Protein accession | YP_001747384 |
Protein GI | 170719696 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCAC TGTTTTGCGT TCTGGGAGTG TTGGCCGTGA TGCTGGCGGC GCCAGCCTTG GGCCAGGGCA AACTGCGGCT GGTGGCCGAT ACCTGGCCGC CGTTCACCGA TGCCGGTATG CCCGGTGCTG GCCTTGCCAC CAGCATCGTC ACCACGGCGC TGGCGCGTGC AGGTTACCCC AGCGAGTACC AGGAGGTACC GTGGGCACGG GCGCTGCTCG GGGTTAGCGA AGGCCGCTAC GACGTATTGA TCAATGCCTG GTACAACGAT TCGCGCACCC GCATCGGCCA GTTTTCCAAG GCCTACCTGA CCAACCGCAT CCGTTTGCTA AAGCGCAAGG GCGACAGCTT CCGTTACAGG CGCCAGGCTG ATCTTTATCC CTACAGCATT GCCGTGGTGC GTGATTATGC CTACTCACCC GAATTCGATA GCGACACCCG CTTGCACAAG GTGCCGGTAG GCAACTTTTC CTCCGCCGTG CGCATGCTGG CGGCAGGGCG GGTCAACCTG GCGGTGGAAG ATGAATTCGT GGCGCGCTAC AACCTGCAGC GCGAACCCGA AGCGGTGCGC GATGGGGTGG TGATGGTCGA GCCCCCGCTG GGCGAGAACA CCCTGCATAT CCTGGTGAGC CTCAAGCATC CTGAGCATCG GCAGATCGTC GAGCGGTTCG AGCGCAGCAT TGCAGCGATG AAGGCAGACG GCAGCTATGC ACGGCTTCTG CGCCAGCATG GCTTTTGA
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Protein sequence | MRPLFCVLGV LAVMLAAPAL GQGKLRLVAD TWPPFTDAGM PGAGLATSIV TTALARAGYP SEYQEVPWAR ALLGVSEGRY DVLINAWYND SRTRIGQFSK AYLTNRIRLL KRKGDSFRYR RQADLYPYSI AVVRDYAYSP EFDSDTRLHK VPVGNFSSAV RMLAAGRVNL AVEDEFVARY NLQREPEAVR DGVVMVEPPL GENTLHILVS LKHPEHRQIV ERFERSIAAM KADGSYARLL RQHGF
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