Gene PputW619_0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0510 
Symbol 
ID6109418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp558126 
End bp558863 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID641620266 
Productextracellular solute-binding protein 
Protein accessionYP_001747384 
Protein GI170719696 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCAC TGTTTTGCGT TCTGGGAGTG TTGGCCGTGA TGCTGGCGGC GCCAGCCTTG 
GGCCAGGGCA AACTGCGGCT GGTGGCCGAT ACCTGGCCGC CGTTCACCGA TGCCGGTATG
CCCGGTGCTG GCCTTGCCAC CAGCATCGTC ACCACGGCGC TGGCGCGTGC AGGTTACCCC
AGCGAGTACC AGGAGGTACC GTGGGCACGG GCGCTGCTCG GGGTTAGCGA AGGCCGCTAC
GACGTATTGA TCAATGCCTG GTACAACGAT TCGCGCACCC GCATCGGCCA GTTTTCCAAG
GCCTACCTGA CCAACCGCAT CCGTTTGCTA AAGCGCAAGG GCGACAGCTT CCGTTACAGG
CGCCAGGCTG ATCTTTATCC CTACAGCATT GCCGTGGTGC GTGATTATGC CTACTCACCC
GAATTCGATA GCGACACCCG CTTGCACAAG GTGCCGGTAG GCAACTTTTC CTCCGCCGTG
CGCATGCTGG CGGCAGGGCG GGTCAACCTG GCGGTGGAAG ATGAATTCGT GGCGCGCTAC
AACCTGCAGC GCGAACCCGA AGCGGTGCGC GATGGGGTGG TGATGGTCGA GCCCCCGCTG
GGCGAGAACA CCCTGCATAT CCTGGTGAGC CTCAAGCATC CTGAGCATCG GCAGATCGTC
GAGCGGTTCG AGCGCAGCAT TGCAGCGATG AAGGCAGACG GCAGCTATGC ACGGCTTCTG
CGCCAGCATG GCTTTTGA
 
Protein sequence
MRPLFCVLGV LAVMLAAPAL GQGKLRLVAD TWPPFTDAGM PGAGLATSIV TTALARAGYP 
SEYQEVPWAR ALLGVSEGRY DVLINAWYND SRTRIGQFSK AYLTNRIRLL KRKGDSFRYR
RQADLYPYSI AVVRDYAYSP EFDSDTRLHK VPVGNFSSAV RMLAAGRVNL AVEDEFVARY
NLQREPEAVR DGVVMVEPPL GENTLHILVS LKHPEHRQIV ERFERSIAAM KADGSYARLL
RQHGF