| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0478 |
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| Symbol | |
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| ID | 6109386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 524585 |
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| End bp | 525202 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620234 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001747352 |
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| Protein GI | 170719664 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCACG GTGAACGTTT CAACGCTTGG ACCCATCTGG TCGGTGCAAT CCTGGCCTGC
ATTGGCGGCA TCTGGCTGAT CGTCGTCGCA GGCCTGCAGG GTGACCCCTG GAAGATCGTC
AGTTTTTCCA TCTACGGCGG CACGCTGTTG CTGCTCTACA GCATCTCGAC CCTCTACCAC
AGCACCCGCG GCCGGGCGAA GGTGATCATG CGCAAGCTCG ATCACCTGTC CATCTACCTG
CTGATCGCCG GCAGCTACAC ACCGTTCTGC CTGGTGAGCC TGCGCGGGCC CTGGGGCTGG
AGCCTGTTCG GGGTGGTCTG GGGGTTGGCG GTGATCGGTA TGCTGCAGGA AATCAAGCCA
CGATCGGAGG CGCGGGTCCT ATCGATCATC ATCTATGCGG TGATGGGCTG GATCGTGCTG
GTGGCGGTCA AACCGCTGCT GCAAAGCCTG GGCACCGCCG GCTTTGCCTG GCTGGCGGCT
GGCGGTGTGT TTTACACCGT GGGCATCATT TTCTTCGCAT TTGACAGCCG ATTCCGCCAC
TGGCACGGCA TCTGGCACCT GTTCGTGATT GCTGGCAGCC TGATGCACTT CGTGGCGGTA
TCGCTCTACG TGCGTTAA
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| Protein sequence | MYHGERFNAW THLVGAILAC IGGIWLIVVA GLQGDPWKIV SFSIYGGTLL LLYSISTLYH
STRGRAKVIM RKLDHLSIYL LIAGSYTPFC LVSLRGPWGW SLFGVVWGLA VIGMLQEIKP
RSEARVLSII IYAVMGWIVL VAVKPLLQSL GTAGFAWLAA GGVFYTVGII FFAFDSRFRH
WHGIWHLFVI AGSLMHFVAV SLYVR
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