| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0467 |
|---|
| Symbol | |
|---|
| ID | 6109375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 511749 |
|---|
| End bp | 512267 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641620223 |
|---|
| Product | bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_001747341 |
|---|
| Protein GI | 170719653 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTAC CCAATCCCGC CGACCTGATC CGGCAGATGG CTGTCGACCT TCGCGCCCAT
CTCGCCCGCC GCGGCATCAC CGAGCCGCGC TACATCGGCA TCCGCACCGG CGGCGTCTGG
GTAGCCCAGG CCCTGCAGCA GGAACTGGGC GATACCAGCC CACTGGGCAC CCTGGACGTG
TCGTTCTACC GCGACGACTT CAGCCAGAAC GGCCTGCACC CGCAAGTGCG CCCGTCAGAG
CTGCCGTTCG AGGTCGAAGG CCAGCACCTG GTACTGATCG ACGACGTACT GATGAGCGGC
CGCACCATTC GCGCCGCGCT CAACGAACTG TTCGATTACG GGCGCCCGGC CAGCGTGACC
CTGGTCTGCC TGCTTGACCT GGACGCCGGC GAACTGCCGA TCCGCCCTAA CGTGCTGGGT
GCAACCCTGT CACTGGCCGC CCATGAACGG GTAAAATTGA CCGGCCCCGC ACCGCTCGCA
CTTGAGCGCC AGGACCTCGC CACCGCTTCC GCCCTTTAA
|
|---|
| Protein sequence | MSLPNPADLI RQMAVDLRAH LARRGITEPR YIGIRTGGVW VAQALQQELG DTSPLGTLDV
SFYRDDFSQN GLHPQVRPSE LPFEVEGQHL VLIDDVLMSG RTIRAALNEL FDYGRPASVT
LVCLLDLDAG ELPIRPNVLG ATLSLAAHER VKLTGPAPLA LERQDLATAS AL
|
|---|
| |