Gene PputW619_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0438 
Symbol 
ID6109346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp481450 
End bp481887 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content59% 
IMG OID641620194 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001747312 
Protein GI170719624 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.905238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGGC TGCTGCAGCG TGTGCGCGGC GCGCGGGTAG AGGTGGCGGG TGAAATTGTC 
GGCGCCATCG ACCAAGGCTT GTTGGTGCTG GTGGCGGTAG AGCCTGAAGA TACCCGTGAA
CAGGCCGATA AGCTGTTGCA CAAGTTGCTC AACTACCGCG TTTTCAGCGA TGAGCAGGGC
AAGATGAACC TATCCCTCAA GGATGTGGGC GGTGGATTGC TGCTGGTGTC CCAGTTCACC
TTGGCTGCGG ACACCCGCAG CGGCATGCGT CCGAGCTTTT CGACGGCTGC GCCGCCAGCG
CTCGGTGCCG AATTGTTCGA CTATCTTTTG CAGCAAGCCC AGGGCCAGCA TGCAGATGTG
GCAAGCGGCC GGTTCGGTGC TGACATGCAG GTGCACCTGG TCAATGATGG CCCTGTGACT
TTTCTGTTAC AAATATGA
 
Protein sequence
MKGLLQRVRG ARVEVAGEIV GAIDQGLLVL VAVEPEDTRE QADKLLHKLL NYRVFSDEQG 
KMNLSLKDVG GGLLLVSQFT LAADTRSGMR PSFSTAAPPA LGAELFDYLL QQAQGQHADV
ASGRFGADMQ VHLVNDGPVT FLLQI