| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0433 |
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| Symbol | |
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| ID | 6109341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 471252 |
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| End bp | 472655 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641620189 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001747307 |
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| Protein GI | 170719619 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.537388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAG CTCAAGGTCT CAAGCGTGGG CTATCGGCCC GACATATCCG TTTCATGGCG
CTCGGTTCCG CAATCGGTAC CGGGCTTTTC TATGGTTCCG CCTCTGCCAT CCAGATGGCC
GGGCCGGCCG TACTGCTGGC TTACCTGATT GGCGGCGCAG CCGTGTTCAT GGTCATGCGC
GCCCTCGGCG AGATGGCCGT GCACAACCCC GTCGCCGGCT CCTTCGGCCA TTACGCCACG
ACCTACCTCG GCCCAATGGC CGGTTTTATC CTTGGCTGGA CTTACGCATT CGAGATGGTC
ATCGTCGCCA TCGCCGACGT CACGGCCTTT GGCATCTACA TGGGTTTCTG GTTTCCTGAA
GTGGCCCGCT GGATCTGGGT GCTAGGCATC GTCTTCCTGA TAGGCGGCCT GAACCTGTGC
AACGTCAAGG TGTTCGGCGA GATGGAGTTC TGGCTGTCGC TGCTCAAGGT CGGTGCCATC
GTCGCGATGA TCCTCGCCGG CCTCGGTATC ATGGCCTTCG GCTTCAGCCA GGTTGGCACC
GGGCATGCGG TTGGTTTGAG CAACCTGGTC GAGCACGGCG GCTTCATGCC CAATGGCGTC
GGCGGCTTGA TCGCCTCCTT CGCGGTGGTC ATGTTCGCCT TCGGCGGCAT CGAAATCATC
GGCGTCACTG CGGGTGAGGC CAAGGACCCG CAACGGGTCA TCCCCAAGGC CATCAATGCC
GTGCCGTTGC GTATCCTGCT GTTCTACGTG CTGACCCTGT TTGTGCTGAT GTGCCTTTAC
CCGTGGCCGC AGATCGGCAG CGAAGGTAGC CCGTTCGTGC AGATATTCAG CAACCTGGGG
ATCGGGTCGG CGGCGGCAGT GCTCAACGTC GTGGTGATTT CCGCTGCGGT TTCTGCCATC
AACAGTGACA TCTTCGGTGC TGGCCGCATG ATGTACGGCC TCGCCCAGCA AGGCCATGCG
CCGCGCGCCT TCAGCCAGCT GTCCAGGCAC GGAGTGCCGT GGATGACGGT AGTGGTGATG
GGGGCTGCGC TGTTGATTGG CGTGGTGCTC AACTACCTGA TCCCCGAGAA CGTGTTTCTG
CTGATCGCCT CCATCGCCAC GTTTGCCACC GTGTGGGTGT GGTTGATGAT CCTGGTTACC
CAGGTTGCCA TGCGCCGCAG CATGAGCCGC GAGGAAGCGG CCCGGCTCAA GTTCCCGGTA
CCGTTCTGGC CCTACGGCCC GGCCATGGCC ATTGCGTTCA TGGTGTTCAT CTTTGGCGTG
CTCGGTTACT TCCCCGATAC ACAGGCAGCG TTGCTTGTCG GCGTGATCTG GGTGGTGTTT
CTGGTTGCGT CCTACCTGTT GTGGTGCAAA CCGCGGGCAG GGCAGGGCGA GGTGGCCCAG
GCAGCGGCCG AGCTGCATCG CTAG
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| Protein sequence | MQQAQGLKRG LSARHIRFMA LGSAIGTGLF YGSASAIQMA GPAVLLAYLI GGAAVFMVMR
ALGEMAVHNP VAGSFGHYAT TYLGPMAGFI LGWTYAFEMV IVAIADVTAF GIYMGFWFPE
VARWIWVLGI VFLIGGLNLC NVKVFGEMEF WLSLLKVGAI VAMILAGLGI MAFGFSQVGT
GHAVGLSNLV EHGGFMPNGV GGLIASFAVV MFAFGGIEII GVTAGEAKDP QRVIPKAINA
VPLRILLFYV LTLFVLMCLY PWPQIGSEGS PFVQIFSNLG IGSAAAVLNV VVISAAVSAI
NSDIFGAGRM MYGLAQQGHA PRAFSQLSRH GVPWMTVVVM GAALLIGVVL NYLIPENVFL
LIASIATFAT VWVWLMILVT QVAMRRSMSR EEAARLKFPV PFWPYGPAMA IAFMVFIFGV
LGYFPDTQAA LLVGVIWVVF LVASYLLWCK PRAGQGEVAQ AAAELHR
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