| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0427 |
|---|
| Symbol | |
|---|
| ID | 6109335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 464260 |
|---|
| End bp | 464832 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641620183 |
|---|
| Product | Lipocalin family protein |
|---|
| Protein accession | YP_001747301 |
|---|
| Protein GI | 170719613 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3040] Bacterial lipocalin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.861168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTC TGCACCTGCT GCTGGGGTTG TGCCTGGTGA TGCTGTTGGG TGGCTGCGCC
ACTTCGGCCA ACGATCCGTT GGCACCCAAG ACCGCCGGCA ATGTCGACCT CAAGCGCTAC
CAGGGCAAAT GGTACGAGCT GGCGCGTTTG CCGATGCCGT ACCAGAGCGA GTGCGCCCAG
TCCGAAGCGC ATTACAACCT CAAGCCTGAT GGTTCGTACG GGGTGCTGAA CCGCTGCCGC
ACGATGGGTG ACGAGTGGCT GCGCGCCGAG GGGCATGCCA ACATCCAGCA GCCGGGGCAT
ACCGACAGGT TGTGGGTTGA GTTCGATAAC TGGTTCACCC GCCTGGTACC GGGCCTGACC
AAGGGGGAGT ACTGGATCCT TTACGTGGAC GACCGCTACC GCACGGCGAT TGTCGGCAGC
CCTGACCGCA AGTACCTGTG GATACTGTCG CGTACGCCGA GCCTGCCAGC ATGGGAGCGC
GAGAGCCTGT TGGCCAAGGC CCGGCAGCAG GGTTATGACA CCAGCCGTTT GATCTGGCGC
ATGGCGGACA AGCAGATCGT GCAGATGCAT TGA
|
|---|
| Protein sequence | MTRLHLLLGL CLVMLLGGCA TSANDPLAPK TAGNVDLKRY QGKWYELARL PMPYQSECAQ
SEAHYNLKPD GSYGVLNRCR TMGDEWLRAE GHANIQQPGH TDRLWVEFDN WFTRLVPGLT
KGEYWILYVD DRYRTAIVGS PDRKYLWILS RTPSLPAWER ESLLAKARQQ GYDTSRLIWR
MADKQIVQMH
|
|---|
| |