| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0422 |
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| Symbol | |
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| ID | 6109330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 457632 |
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| End bp | 460082 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620178 |
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| Product | glycogen/starch/alpha-glucan phosphorylase |
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| Protein accession | YP_001747296 |
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| Protein GI | 170719608 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.879107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAGG AACCCAAAGC ACGTGACGCC GAGGTGGCCG ACTTTCGCGC CGCTGTACTG
GACAAGCTGA CCTACGCGGT CGGCAAAGAC CCGGAGCACG CCTTTGACCA CGACTGGTTC
GAGGCCATTG CCCTGGCTGC CCGTGATCAC ATGGTCGATC ACTGGATGGA TCACACCCGT
CAGGCCTATC GACGCAGCCA GAAACGGGTC TATTACCTCT CTCTGGAATT TCTCATCGGG
CGGCTGCTCT ACGACAGCCT GAGCAACCTT GGCCTGCTGG ACATAGCCCG TGATGCGCTG
GAGGGGCTGG ACGTGGACCT TGAGCGCATC CGGTTGCTGG AGCCGGACGC CGCATTGGGC
AACGGTGGCC TGGGCCGCCT GGCTGCCTGT TTCATGGAGA GTATGTCGAC GCTGGGCATC
GCCGCCCACG GCTACGGCAT CCGCTATGAG CACGGGCTGT TCCGCCAGGC CATGGTCGAC
GGATGGCAGC AGGAACAGAC CGAAAACTGG CTGGATTTCG GCAACCCTTG GGAGTTCGAG
CGCGCCGAGG TGATCTACCC GATCAGTTTC GGCGGCAGCG TCGAAACGGT GCAAGATACC
CATGGTCAGC AACGTCAAGT GTGGTGGCCG GGCGAGACGG TACGGGCGGT CGCCTACGAC
ACGCCGGTGG TCGGCTGGCG CGGCTCCAGT GTCAACACCT TGCGCCTGTG GCGCGCACGG
GCGCTGGAAG AGCTGCACCT GGAACGCTTC AATGCCGGTG ACCACCTTGG CGCGGTGGCC
GAAGTGGCTC GCGCCGAGAG CATCTCGCGT GTGCTGTACC CGGCCGACAG CACAGAAGCG
GGGCAGGAAT TGCGCCTGCG CCAGGAATAC TTCTTCGTAT CGGCGTCGCT GCAGGACCTG
CTGCGACGCC ACCTGAACAT GCACAAGGAC TTGCTCAACC TGCCGGATGC TGCGGCCATC
CAGCTCAACG ACACGCACCC GTCGATTGCC GTGGCCGAAT TGATGCGGCT GTTGGTCGAC
CAGCATGAAA TCCCGTGGGA AAAAGCCTGG GAGCTGACCG TCGGCACCTT GGCCTACACA
AACCACACCC TGCTGCCAGA GGCGCTGGAG ACGTGGCCGG TGGCCTTGAT GGAGCGCATG
CTGCCGCGGC ACATGCAGAT CATCTACCTG ATCAATGCCT ACCATATCGA TGCCCTGCGC
GCGAAAGGCC TGCATGACTT CGACGTGCTG CGGGCGGTGT CGCTGATCGA GGAAGACAAC
GGCCGCCGGG TGCGCATGGG CAACCTTGCC TTCCTCGGCT CGCACAGCGT CAACGGTGTA
TCCGCGCTGC ACAGCAGGCT GATGAAAAGC ACGGTGTTCG CCGAGTTGCA CAAGCTCTAC
CCCCAGCGAA TCAACAACAA GACCAATGGC ATTACCTTCC GCCGCTGGCT GTACCAGTCC
AACCCGCAGT TGACGGCGAT GCTGGTGGAG GCCCTGGGGC CAGAATTGCT TGACGACCCG
CAAGGGCGCC TGGCCAATCT GGTGCCGTTC GCCGACAAGG GCGGCTTCCT CAAGCAGTTC
GCCGCGCAGC GCCTGCACAG CAAGCGCGCG TTGGCCGGCA TCATCCAGGA CCGGGTGGGT
GTCACGGTCA ACCCTGAGGC GCTGTTCGAT GTGCAGGTCA AGCGCATCCA CGAGTACAAG
CGCCAGCTGC TCAACCTGTT GCACACCGTG GCGTTGTACC AGGCCATCCG TAACGACCCG
GGCACCAACT GGGTGCCGCG GGTGAAGATC TTTGCTGGCA AGGCCGCAGC CAGCTACCAC
CAGGCCAAGC TGATCATCAA GCTGGCCAAT GACATCGCCC GGGTGGTCAA CAACGACCCT
ACCGTGCGGG GCCTGCTCAA GGTGGTGTTC CTGCCCAACT ACAACGTCAG CCTGGCCGAG
AGCATCATCC CGGCGGCGGA CCTGTCGGAA CAGATTTCCA CGGCCGGCTA CGAAGCGTCG
GGCACCAGCA ACATGAAGTT CGGGCTCAAT GGTGCACTCA CCATTGGTAC CCTCGATGGC
GCCAACGTCG AGATGTGCGA ACAGGTGGGT GCTGACAACA TGTTCATTTT CGGCTTGACC
GCGCAGCAGG TAGAGGCGCG CAAGCGTGAC GGTGATTTTG GTGCCGTGGC CGCGATAGCC
GCCTCCCACC GCTTGAATGA TGTGCTACAG GCGATCCGCA GTGGCGTGTT CTCCCCCGAT
GATCCGTCGC GCTATGCCGG GCTGATCGAC GGGCTGGTGG CTTACGACCG CTTCCTGGTC
TGTGCCGACT TCGATGCCTA CTGGGATGCC CAGCGGCGGG TGGAGGAGTT GTGGCATACG
CCACAGGCGT GGTGGCGGAT GGCGGTGCTC AACACCGCGC GGATGGGGTG GTTCTCTTCG
GACCGGACCA TTCGCGAGTA TGCGACCGAG ATCTGGAAGG TGCTGGATTG A
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| Protein sequence | MSQEPKARDA EVADFRAAVL DKLTYAVGKD PEHAFDHDWF EAIALAARDH MVDHWMDHTR
QAYRRSQKRV YYLSLEFLIG RLLYDSLSNL GLLDIARDAL EGLDVDLERI RLLEPDAALG
NGGLGRLAAC FMESMSTLGI AAHGYGIRYE HGLFRQAMVD GWQQEQTENW LDFGNPWEFE
RAEVIYPISF GGSVETVQDT HGQQRQVWWP GETVRAVAYD TPVVGWRGSS VNTLRLWRAR
ALEELHLERF NAGDHLGAVA EVARAESISR VLYPADSTEA GQELRLRQEY FFVSASLQDL
LRRHLNMHKD LLNLPDAAAI QLNDTHPSIA VAELMRLLVD QHEIPWEKAW ELTVGTLAYT
NHTLLPEALE TWPVALMERM LPRHMQIIYL INAYHIDALR AKGLHDFDVL RAVSLIEEDN
GRRVRMGNLA FLGSHSVNGV SALHSRLMKS TVFAELHKLY PQRINNKTNG ITFRRWLYQS
NPQLTAMLVE ALGPELLDDP QGRLANLVPF ADKGGFLKQF AAQRLHSKRA LAGIIQDRVG
VTVNPEALFD VQVKRIHEYK RQLLNLLHTV ALYQAIRNDP GTNWVPRVKI FAGKAAASYH
QAKLIIKLAN DIARVVNNDP TVRGLLKVVF LPNYNVSLAE SIIPAADLSE QISTAGYEAS
GTSNMKFGLN GALTIGTLDG ANVEMCEQVG ADNMFIFGLT AQQVEARKRD GDFGAVAAIA
ASHRLNDVLQ AIRSGVFSPD DPSRYAGLID GLVAYDRFLV CADFDAYWDA QRRVEELWHT
PQAWWRMAVL NTARMGWFSS DRTIREYATE IWKVLD
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