| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0419 |
|---|
| Symbol | |
|---|
| ID | 6109327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 453493 |
|---|
| End bp | 454947 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641620175 |
|---|
| Product | thiamine biosynthesis protein ThiI |
|---|
| Protein accession | YP_001747293 |
|---|
| Protein GI | 170719605 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.895602 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA TCGTCAAAGT CTTCCCAGAA ATCACCATCA AGAGCCGGCC GGTACGCAAG
CGCTTCATCC GCCAGCTCGG CAAGAATATC CGTAACGTGC TCAAGGATCT CGACCCTGAG
CTCGCGGTCG ATGGTGTCTG GGACAACCTC GAAGTGGTTA CCCGCGTCGA AGACGAAAAA
GTCCAGCGCG AGATGATCGA GCGCCTCACC TGTACCCCGG GTATCACCCA CTTCCTGCAG
GTGGAGGAAT ACCCGCTCGG TGACTTCGAC GATATCGTCG CCAAGTGCAA GCAGCACTTT
GGCCACCTGC TGGGCGGCAA GTATTTCGCC GTACGCTGCA AGCGCGGGGG CCACCATGAC
TTCACCTCGA TGGACGTCGA CCGCTACGTT GGCAGCCAGC TGCGCCAGCA GTGCGGCGCC
GCTGGTATCG AGCTGAAGCA ACCTGAAGTG ACAGTGCGCA TCGAAATCCG CAATCAGCGC
CTTTACGTGA TCCACAACCA GCACCAAGGC ATTGGCGGCT ACCCGCTGGG CGCCCTGGAG
CAGACACTGG TACTGATGTC CGGCGGCTTC GACTCAACCG TGGCGGCCTA CCAGATGATG
CGCCGCGGCC TGATGACCCA TTTCTGCTTC TTCAATCTCG GCGGCCGGGC CCACGAACTG
GGCGTGATGG AAGTGGCCCA CTACCTGTGG AAAAAGTACG GCAGCAGCCA GCGCGTACTG
TTCATCAGCG TGCCGTTCGA AGAAGTGGTC GGCGAGATCC TCAACAAAGT CGACAACAGC
TACATGGGGG TGACCCTCAA GCGCATGATG CTGCGCGGCG CTGCACGCAT GGCCGACCGT
CTGGAAATCG ATGCGCTGGT CACCGGCGAA GCGATCTCCC AGGTGTCCAG CCAGACGCTG
CCGAACCTGT CGATCATCGA CTCGGCCACC GACAAGCTGG TGCTGCGCCC ATTGCTGGCC
AGCCACAAGC AGGACATCAT CGACCAGGCG ACCGAAATCG GCACCGCCGA CTTCGCCAAG
CACATGCCTG AATATTGTGG CGTGATCTCG GTTAACCCGA CCACCCATGC CAAACGTCAC
CGCATGGAGC ATGAAGAGAA GCAGTTCGAC ATGGCCGTGC TGGAGCGCGC CCTCGAACGT
GCCAAGTTCA TCTCGATCGA TCATGTGATC GACGAGCTGG GCAAGGACGT GGAAATCGAG
GAAGTAAGCG AAGCGCTGCC AGGCCAGATC GTGATCGACA TCCGTCACCC TGACGCCCAG
GAAGACGAGC CTTTGGTGCT CGAGGGTATC GAAGTTCAGG TGATGCCGTT CTACGCGATC
AACAGCAAGT TCAAGCAGCT GGATGAAACC CGCCAGTACT TGCTGTATTG CGACAAAGGT
GTGATGAGCC GATTGCACGC ACACCACCTG CTCAGTGAGG GACATGCCAA TGTGCGTGTT
TATCGTCCGG CATAA
|
|---|
| Protein sequence | MKLIVKVFPE ITIKSRPVRK RFIRQLGKNI RNVLKDLDPE LAVDGVWDNL EVVTRVEDEK
VQREMIERLT CTPGITHFLQ VEEYPLGDFD DIVAKCKQHF GHLLGGKYFA VRCKRGGHHD
FTSMDVDRYV GSQLRQQCGA AGIELKQPEV TVRIEIRNQR LYVIHNQHQG IGGYPLGALE
QTLVLMSGGF DSTVAAYQMM RRGLMTHFCF FNLGGRAHEL GVMEVAHYLW KKYGSSQRVL
FISVPFEEVV GEILNKVDNS YMGVTLKRMM LRGAARMADR LEIDALVTGE AISQVSSQTL
PNLSIIDSAT DKLVLRPLLA SHKQDIIDQA TEIGTADFAK HMPEYCGVIS VNPTTHAKRH
RMEHEEKQFD MAVLERALER AKFISIDHVI DELGKDVEIE EVSEALPGQI VIDIRHPDAQ
EDEPLVLEGI EVQVMPFYAI NSKFKQLDET RQYLLYCDKG VMSRLHAHHL LSEGHANVRV
YRPA
|
|---|
| |