| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0408 |
|---|
| Symbol | |
|---|
| ID | 6109316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 442842 |
|---|
| End bp | 444128 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641620165 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001747283 |
|---|
| Protein GI | 170719595 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG4942] Membrane-bound metallopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.37343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGCG CCCTGATCCT CCTAGCCCTG TCTTGCCTGC TCAGCCCGGC CTTCGCCGAC
GAGCGCGCAC AGACCCAGCA ACAACTGGAC GCCACCCGCC AGGACATCGC CGAGCTCAAG
AAGACGCTGG GCAAGCTCCA GGAAGAAAAA TCCGGCGTGC AGAAAGACCT AAAAGCCACC
GAGACCGACA TCGGCAACCT CGAAAAGCAG GTGGAGGCTC TGCAGCAAGA ACTAAAAAAG
ACCGAGGGCG AGCTGGAGCG CCTTGATACC GAGAAAAAAA AACTCCAGAG CTCGCGCATT
GAACAACAGC GACTGATCGC CATTCAGGCG CGGTCCGCCT ACCAGAACAA TGGCCGTGAG
GAATACCTCA AGCTGCTGCT CAACCAGCAG AACCCAGAGA AGTTCGCCCG CACCCTCAGC
TACTACGACT ACCTGAGCAA GGCGCGCATG GAGCAACTGC GTGCCTTCAA CGAGACCTTG
CGCCAGCTGG CCAATGTCGA GCAGGACATT TCCCGCCAGC AAGAACAATT GCTGGCCCAG
CGCGCCGACC TCGACAGCCG TCGCCAGGCT CTGGAAGCCG AGCGTGGAAA ACGTCAGCAG
GTGCTGGCCA AGCTCAACAG TGACATGAAA GACCGCGACA AGAAGCTGCA GGCCCGTGAA
CAAGACCAGG CGGACCTTGC CAAGGTGCTC AAGACCATCG AGGAAACCCT TGCCCGTCAG
GCCCGTGAGG CCGAGGAAGC GCGCAAGAAG GCCCTGCTGG CCGAGCAGGA GGCCCAAAAG
CGCCGACAGC AGCAAGCGCT GGCCGCACAG CAAGACAGCG AACCGCCAAA AAAGGCGCGC
ACCACCCTTG GCCCGTTGGT TTCCAGCGAC AGCTCAACCT ACGGCGGTGC TTTTTCTGCT
GCACGGGGCA AACTTCCCTG GCCCGTCAAT GGTCGATTGC TGGCACGTTT CGGTGAAGCC
CGTGGCAGCG ATGCCCGAGC CAAGTGGGAC GGCGTGATGA TCAGCGCCAA CCCCGGCACC
CAGGTGCGCG CCGTGCACGG CGGGCGCGTG GTATTCGCCG ACTGGTTGCG CGGTGCTGGA
CTTCTGGTCA TTCTCGACCA TGGTAATGGT TACCTGAGCC TGTACGGCCA CAACCAGAGC
CTGCTCAAGA GCGCCGGGGA CATCGTCAAG GCCGGCGAAG CCATTTCCAC AGTTGGCGAC
AGCGGCGGCC AGGATGCCGC CGGCTTGTAC TTCGCCATCC GCCAGCAGGG CCGGCCCACC
GACCCTTCGC AGTGGTGCAG AGGTTAA
|
|---|
| Protein sequence | MLRALILLAL SCLLSPAFAD ERAQTQQQLD ATRQDIAELK KTLGKLQEEK SGVQKDLKAT
ETDIGNLEKQ VEALQQELKK TEGELERLDT EKKKLQSSRI EQQRLIAIQA RSAYQNNGRE
EYLKLLLNQQ NPEKFARTLS YYDYLSKARM EQLRAFNETL RQLANVEQDI SRQQEQLLAQ
RADLDSRRQA LEAERGKRQQ VLAKLNSDMK DRDKKLQARE QDQADLAKVL KTIEETLARQ
AREAEEARKK ALLAEQEAQK RRQQQALAAQ QDSEPPKKAR TTLGPLVSSD SSTYGGAFSA
ARGKLPWPVN GRLLARFGEA RGSDARAKWD GVMISANPGT QVRAVHGGRV VFADWLRGAG
LLVILDHGNG YLSLYGHNQS LLKSAGDIVK AGEAISTVGD SGGQDAAGLY FAIRQQGRPT
DPSQWCRG
|
|---|
| |