Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0407 |
Symbol | |
ID | 6109315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 441436 |
End bp | 442749 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641620164 |
Product | carboxyl-terminal protease |
Protein accession | YP_001747282 |
Protein GI | 170719594 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.295473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCACT CGCCTCGTCT CACCCAGCTG GCCCTGACCA TCGCCCTGGC GACTGGTATG CCTTTGGCCA TCGCTGCCGA GCCGGCGCCC GCCGCGGTGC CTGCCACCGA GGTGACCGCC AAGGCCCCGC TGCCACTGGA AGAGCTGCGC ACCTTCGCCG AGGTCATGGA CCGCATCAAA GCGGCCTATG TCGAGCCGGT AGACGACAAG ACGCTGCTGG AGAACGCCAT CAAAGGCATG CTCAGCAACC TCGATCCACA TTCGGCCTAC CTTGGCCCCG AGGACTTCCA GGAGCTGCAG GAAAGCACCA GTGGCGAGTT CGGTGGCCTG GGTATCGAAG TCGGCCAGGA AGACGGCTTC GTCAAGGTAG TCTCGCCCAT CGATGACACC CCCGCCTCGC GCGCCGGCGT GCAGGCTGGC GACCTCATCG TCAAGATCAA CGGTGCGCCC ACCCGTGGCC AGAGCATGAC CGAAGCGGTC GACAAGATGC GCGGCAAAGT CGGCGAGAAG ATCACCCTGA CCCTGGTACG TGACGGCGGC ACCCCGTTCG ATGTGAACCT GGTCCGTGCG GTGATCCAGG TCAAGAGCGT TAAGAGCCAG TTGCTGGAAA ACGACTACGG CTACATCCGC ATCACCCAGT TCCAGGTCAA GACCGGCGAC GAAGTCGGCA AGGCATTGGC CAAGATGCGC AAAGACAATG GCAAGAAACT GCGCGGCGTT GTTCTGGACC TGCGCAACAA CCCCGGTGGC GTCCTCCAGT CGGCGGTGGA AGTGGCCGAC CACTTCCTGA CCAAGGGCCT GATCGTGTAC ACCAAGGGCC GTATCGCCAA CTCCGAACTG CGCTTCTCCG CTGACCCGGC CGACGCCAGC GAGGCCGTAC CATTGGTGGT ACTGATCAAC GGTGGCAGCG CCTCGGCATC GGAAATCGTC GCCGGTGCCC TGCAAGACCA GAAACGCGCC GTACTGATGG GCACTGACAG CTTCGGAAAA GGCTCGGTGC AGACCGTGCT GCCGCTGGCC AACGACCGTG CCCTGAAGCT CACCACCGCG CTGTACTTCA CCCCCAATGG CCGCTCGATC CAGGCCCAGG GTATCGTGCC CGACATCGAG GTGCGCCCGG CCAAACTTAC CGCAGAGGTC GATACCGAAA ACTTCAAGGA AGCTGACCTG CAAGGCCACC TGGGCAATGG CAACGGTGGC GCTGACCGCC CGACCGGCAG CAGCAAGCGC AAGGAGCGCC CGCAGGACGA TGACTTCCAG CTGAGCCAGG CCCTCAGCCT GCTCAAGGGG CTGAACATCA CCTCCGGCAA ATGA
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Protein sequence | MLHSPRLTQL ALTIALATGM PLAIAAEPAP AAVPATEVTA KAPLPLEELR TFAEVMDRIK AAYVEPVDDK TLLENAIKGM LSNLDPHSAY LGPEDFQELQ ESTSGEFGGL GIEVGQEDGF VKVVSPIDDT PASRAGVQAG DLIVKINGAP TRGQSMTEAV DKMRGKVGEK ITLTLVRDGG TPFDVNLVRA VIQVKSVKSQ LLENDYGYIR ITQFQVKTGD EVGKALAKMR KDNGKKLRGV VLDLRNNPGG VLQSAVEVAD HFLTKGLIVY TKGRIANSEL RFSADPADAS EAVPLVVLIN GGSASASEIV AGALQDQKRA VLMGTDSFGK GSVQTVLPLA NDRALKLTTA LYFTPNGRSI QAQGIVPDIE VRPAKLTAEV DTENFKEADL QGHLGNGNGG ADRPTGSSKR KERPQDDDFQ LSQALSLLKG LNITSGK
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