| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0403 |
|---|
| Symbol | |
|---|
| ID | 6109311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 432731 |
|---|
| End bp | 433387 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641620160 |
|---|
| Product | transcriptional regulator BetI |
|---|
| Protein accession | YP_001747278 |
|---|
| Protein GI | 170719590 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR03384] transcriptional repressor BetI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.714996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAGG TCGGTATGCA ACCCATCCGC CGCCAGCAAT TGATCGAAGC TACGCTGCAA
GCAGTCGATC AGGTCGGCCT GGGAGATGCC AGCATTGCGC TGATTGCCCG TTTGGCCGGT
GTGTCGAACG GCATCATCAG TCACTACTTT CAGGACAAGA ACGGCCTGAT AGCGGCGACG
ATGCGCTACA TCATGAACAT GCTCAACGAG GGCGTGATCG CTCGTCGCCA GGCACTGACC
GACGACAGTC CGCGAGCCCA CCTGAGGGTG ATCATCGAAG GCAACTTCGA TGCCAGCCAG
GTGAATGGCC CGGCAATGAA AACCTGGTTG GCCTTCTGGG CCTCCAGCAT GCACCAGCCG
TCCTTGCACA GGTTGCAGCG GATCAACGAT CACCGCCTGT ATTCCAACCT GTGCTGCCAG
TTCCGCCGCG CCATGCCGCT CGATGAAGCG CGCACCGCCG CCCGCGGCCT GGCTGCCTTG
ATCGACGGGC TGTGGCTGCG CGGAGCGCTG TCGGGCGACG CCTTCGACAC CGACCAGGCG
ATACAGATCG CTTACGAATA CCTGGAACTA CAACTGGCTA AACAGCAGCG CCCGGACACG
CAACCACCGG CCTCTGAAAA AATGCGCACA GCCCTTGCCC AGCCGGCCGG AGCGTGA
|
|---|
| Protein sequence | MPKVGMQPIR RQQLIEATLQ AVDQVGLGDA SIALIARLAG VSNGIISHYF QDKNGLIAAT
MRYIMNMLNE GVIARRQALT DDSPRAHLRV IIEGNFDASQ VNGPAMKTWL AFWASSMHQP
SLHRLQRIND HRLYSNLCCQ FRRAMPLDEA RTAARGLAAL IDGLWLRGAL SGDAFDTDQA
IQIAYEYLEL QLAKQQRPDT QPPASEKMRT ALAQPAGA
|
|---|
| |