| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0391 |
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| Symbol | gltD |
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| ID | 6109171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 415522 |
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| End bp | 416940 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620148 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001747266 |
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| Protein GI | 170719578 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.275213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC GTCTGAGTAA CGACTTCCAG TTCATCGAAG TGGGCCGAAA GGACCCGAAG
AAAAAGCTGC TGCGCCAGCG CAAGAAGGAG TTCGTGGAAA TCTACGAGCC CTTCAAACCC
CAGCAGTCCG TAGAGCAGGC ACACCGCTGC CTGGGCTGCG GTAACCCGTA TTGCGAGTGG
AAGTGCCCGG TGCACAACTT CATCCCTAAC TGGTTGAAGC TGGTCTCCGA AGGCAACATC
CTGGCTGCGG CGGAACTCTC GCACCAGACC AATACCCTGC CGGAAGTCTG CGGCCGTGTG
TGCCCGCAGG ACCGCCTGTG CGAGGGTGCC TGCACACTGA ACGATGGCTT CGGCGCGGTG
ACCATCGGTT CGGTGGAGAA GTACATCACC GACACCGCTT TCGCCATGGG CTGGCGCCCG
GACATGTCCA AGGTCAAACC GACCGGCAAG CGCGTTGCCA TCATCGGTGC TGGCCCGGCG
GGCCTGGGCT GTGCCGACGT GCTGGTGCGC GCCGGGGTTA CCCCGGTGGT GTTTGACAAG
AACCCTGAAA TCGGCGGCTT GCTGACCTTC GGCATCCCTG AGTTCAAGCT GGAAAAGACC
GTGCTGAGCA ATCGTCGCGA AGTCTTCACC GGCATGGGTA TCGAGTTCCG CCTGAACACC
GAAGTGGGCA CCGACATCAC CATGGAACAG CTGCTCGCCG AGTATGACGC CGTGTTCATG
GGTATGGGTA CCTACACCTA CATGAAGGGC GGCTTCCCAG GCGAGGATCT GCCTGGCGTG
CATGACGCGC TGGACTTCCT GATCGCCAAC GTCAACCGCA ACCTGGGCTT CGAGAAGTCG
CCGGAAGACT TCATCGACAT GCAGGGCAAG AAAGTCGTGG TGCTGGGCGG TGGCGACACC
GCAATGGACT GCAACCGCAC CTCGATCCGC CAGGGCGCCA AGGCGGTGAC CTGTGCCTAC
CGTCGTGACG AAGCCAACAT GCCGGGCTCG CGCAAAGAGG TTAAGAACGC CAAGGAAGAA
GGCGTGAAAT TCCTCTACAA CCGTCAGCCG ATCGCCATTG TCGGTGAAGA CAAGGTCGAA
GGCGTGAAGG TGGTCGAGAC CCGTCTTGGC GAGCCTGATG CCCGTGGCCG CCGCAGCCCT
GAGCCAATCC CGGGCTCCGA AGAAATCCTC CCGGCGGACG CCGTGGTGAT CGCGTTCGGC
TTCCGCCCGA GCCCGGCACC CTGGTTCGAG CAGCATGGCA TCCAGATGGA CAGCCAAGGC
CGCGTGGTGG CCCCGGAAAA AGGCAAGTTC AAGCACCAGA CCAGCAACCC GAAAATATTC
GCCGGTGGCG ATATGGTGCG CGGTTCGGAC TTGGTGGTGA CCGCCATTTT CGAAGGTCGT
ACCGCTGCCG AAGGTATCCT GGATTACCTC GAAGTCTGA
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| Protein sequence | MAERLSNDFQ FIEVGRKDPK KKLLRQRKKE FVEIYEPFKP QQSVEQAHRC LGCGNPYCEW
KCPVHNFIPN WLKLVSEGNI LAAAELSHQT NTLPEVCGRV CPQDRLCEGA CTLNDGFGAV
TIGSVEKYIT DTAFAMGWRP DMSKVKPTGK RVAIIGAGPA GLGCADVLVR AGVTPVVFDK
NPEIGGLLTF GIPEFKLEKT VLSNRREVFT GMGIEFRLNT EVGTDITMEQ LLAEYDAVFM
GMGTYTYMKG GFPGEDLPGV HDALDFLIAN VNRNLGFEKS PEDFIDMQGK KVVVLGGGDT
AMDCNRTSIR QGAKAVTCAY RRDEANMPGS RKEVKNAKEE GVKFLYNRQP IAIVGEDKVE
GVKVVETRLG EPDARGRRSP EPIPGSEEIL PADAVVIAFG FRPSPAPWFE QHGIQMDSQG
RVVAPEKGKF KHQTSNPKIF AGGDMVRGSD LVVTAIFEGR TAAEGILDYL EV
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