Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0386 |
Symbol | |
ID | 6109166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 406000 |
End bp | 407268 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641620143 |
Product | type IV pilus secretin PilQ |
Protein accession | YP_001747261 |
Protein GI | 170719573 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4796] Type II secretory pathway, component HofQ |
TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.591623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGGT TGATGAAGTG GCTGGTGGCG GCATTGCTGC CGATGCCGTT GCTGGCGGCA ACGCCTTATC GGGGTGAACC GATTTCGCTG AACTTCCAGG ACGTAGAAGT GCGCCTTGTG TTGCAGGTGC TTGCCGATTA TGCCGGGATC AATCTGGTCG CAAGCGACAC GGTGCAGGGC AGTATTACCT TGCGTCTGCA GGATGTTCCT TGGGATCAGG CTCTGGAACT GGTGTTGCGC AGCAAAGGGC TGGGCCGGCG GGAGGAGGGC AATGTGCTGT TGGTGGCGCC AGCGGTTGAG CTGGCCGAAC AGGCTCTGGG AGCGCGCATG GGGTTGGAGC TGGAGGCCCA ATCGCGGCCG TTGCGCCGCG AGTTGCTGCC GATACACCAC GCCGAGGCCT CGGAACTTGC CGAGTTGCTG CTGGCTACGT TGGCCGATGA CGGCATTCTG ACTGGCCGCG GTAGTTTGAG TGTGGATGTG CGCACCAATA CGCTGGTTGC GCACCAGCCT GAGGACCGGC TTGCCGAGTT GCGCCAGTTG GTTGCGCAAC TGGATGTGCC GGTACGACAG GTAGAGATCG AGGCGCGCAT CGTGGAGGCC AATGTCGATT ACGAGAACAG CCTTGGGGTG CGCTGGGGCC CTCGCCTCTA CAGCGAAGCC CCTGCTTTGG GCAAGGACGT GTTTGTTGAT CTTGGCATGG AGCGGGCCGG CTCCAGCATC GGCTTTGGAG TGTTGCGTGG GGGCGTGCTG TTGGACCTTG AACTCAGCGC CATGGAGAAG ACCGGCAATG GTGAAATCAT TTCCCAGCCC AAGGTGGTCA CCGCTAACAA CGAAACTGCC CGCATCCTCA AAGGTACCGA AGTCCCTTAC CAGGAGACCA CGAAGAGTGG CGCTACGTCG GTTACATTCC GCGAGGCGTC GCTGTCGTTG GAGGTCACTC CGCAGATCAC GCCGGACGGC AAGGTGATCA TGACGGTCAA GGTGACCAAG GACGAGCCTG ATTTCGTCAA TGCCTTGAAC GATGTGCCGC CGATCCGCAA GAACGAGGTC AATGCCAAGG TACGGGTAGC TGACGGGGAA ACCATCGTCA TTGGCGGTGT GTATTCGACT ACGCAAAACA ATGTGGTGGA CAAGGTGCCA TTTTTCGGCG ATCTGCCGTA TGTTGGGCGG CTGTTTCGAC GCGATGCATT ACAAGAGAAA AAATCCGAGC TGCTGGTCTT CCTGACTCCG CGTATCATGA ATGACCAGGC GATTGCTGTG AGTCGTTGA
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Protein sequence | MNGLMKWLVA ALLPMPLLAA TPYRGEPISL NFQDVEVRLV LQVLADYAGI NLVASDTVQG SITLRLQDVP WDQALELVLR SKGLGRREEG NVLLVAPAVE LAEQALGARM GLELEAQSRP LRRELLPIHH AEASELAELL LATLADDGIL TGRGSLSVDV RTNTLVAHQP EDRLAELRQL VAQLDVPVRQ VEIEARIVEA NVDYENSLGV RWGPRLYSEA PALGKDVFVD LGMERAGSSI GFGVLRGGVL LDLELSAMEK TGNGEIISQP KVVTANNETA RILKGTEVPY QETTKSGATS VTFREASLSL EVTPQITPDG KVIMTVKVTK DEPDFVNALN DVPPIRKNEV NAKVRVADGE TIVIGGVYST TQNNVVDKVP FFGDLPYVGR LFRRDALQEK KSELLVFLTP RIMNDQAIAV SR
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