| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0383 |
|---|
| Symbol | |
|---|
| ID | 6109163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 403679 |
|---|
| End bp | 404527 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641620140 |
|---|
| Product | type IV pili biogenesis protein PilM |
|---|
| Protein accession | YP_001747258 |
|---|
| Protein GI | 170719570 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGGAC GCATTGGCAA GGATGCCGGT TCACTGTTGG GGGTTGAAAT TGCCGCCGAT
TCGGTTCGGC TTGTACAACT GCGACGTAGA AAAGGGCGCT GTGAGCGTCT TGCCTGGGAG
GTTGAGCGAT TCGAGCCCGC AGGTACTGCT GATTGGTGGC AGGTGCCCGA TCGCGTTGTT
GCGGCGCTGC GTAGTGCTTG TCGGCGCAGT GGCAGTCGCC AGCGCAGGGT CGCAGTGGCC
CTGCCTGCCT CGCAGGTAAT CTGCAAGTTG TGCCAGCTAC CGGCAGACCT GCCAGTAGCC
GAGATGGAGG CGCAACTTTT GGCTGATGCG GACAGGTTGT TTCCGTTTCC GCTGGAAGAC
CTGGTGATGG ACTTCCAGGT TTTGGGTGCT TCATGTGGAC AGGCTGGCGC ACATGATGTC
CTGGTGGTGG CCTGCCGGCA GACCGTGCTG CAGCCGTTGG AAGCGCTGTT CGATGAGGCT
GGGTTGCAGC TGGAGGTCGT GGAGGTCGAC AGCATCGCCT TGTTGCGAAT GATGCCACAA
CCGCGTGCAG ACGGCTCCGC GCTGCTGCGT CTCGAGCCCG GCGGCGCAAC CCTGCATTGC
TGGTCACAGG GTATGTTGCC GCAGCGGCGC GAAGTGGCCT TGGGCCGGCT GGGTGAACTG
TTTGTCGATG ATCTACAGGT ACAAGACCTG CTTCTGACGG GAAGCGTGCT GCTTGAGCAA
GTTCGGCTCG GTGAATTGTT CGACCAGTTG AGTATGCCTT GCCGGCCATT GCCGCAGGTG
GCAGGTCTTA CATGCCACGA CGACAATATG GCACTGGCGG CTGCCCTGGC GCTGGGAGCT
TTGCGCTGA
|
|---|
| Protein sequence | MLGRIGKDAG SLLGVEIAAD SVRLVQLRRR KGRCERLAWE VERFEPAGTA DWWQVPDRVV
AALRSACRRS GSRQRRVAVA LPASQVICKL CQLPADLPVA EMEAQLLADA DRLFPFPLED
LVMDFQVLGA SCGQAGAHDV LVVACRQTVL QPLEALFDEA GLQLEVVEVD SIALLRMMPQ
PRADGSALLR LEPGGATLHC WSQGMLPQRR EVALGRLGEL FVDDLQVQDL LLTGSVLLEQ
VRLGELFDQL SMPCRPLPQV AGLTCHDDNM ALAAALALGA LR
|
|---|
| |