Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0382 |
Symbol | |
ID | 6109162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 400786 |
End bp | 402492 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641620139 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_001747257 |
Protein GI | 170719569 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGC TCAGCCAGCA AGGTGAGCCT GCGCTTTCCG GCACTCCGCA GCAGTGGCAT GACGTCGATT GGCGTCGGGT TCAGCGGAAT GTCCGGGGAA TGCAGGTGCG AATTGCGAAG GCTTGTCGGG AAGGCAAATG GCGCAAGGTT AAATCCCTGC AACGGATGCT TACCCACTCG AAGTCGGCCA GATACTTGGC CGTACGGAGA GTCACGGAAA ATCAGGGAAG CCGCACGGCG GGAGTCGATA GGCAACTCTG GGACACACCC AACGCTAAAT GGAATGCGGT TGGTCAGTTG AAGACGCGGG GTTACCGGGC TCGGCCACTA CGGCGAGTCT ACATCCCGAA GTCGGATGGA CGGGAACGCC CTCTGGGCAT ACCGACCATG ACGGATAGGG CCATGCAAGC ACTGTACATG CTGGCCCTGT CTCCCATCGC AGAAACCCAG GGCGATCCGA ATAGCTACGG CTTTAGGATC GAACGTTGTA CGGCGGATGC GATGGCGCAG CTCTTCCTGT GTCTTTCCAA ACAGGCTTCC GCCTGTTGGG TTTTGGACGC AGACATCGAA GGGTTCTTCG ACAACATCAA CCATGAATGG CTGTTAGGAA ACGCCCCTAC GGATAACCGG ATGCTTCGGC AGTGGTTGAA GGCTGGAGTC ATCCACAAGG GGCAGTTGCA CGCAACGGAT GCAGGCACGC CACAAGGGGG AATTATCTCC CCGGTGTTGG CGAATCTGGC ACTGGATGGT CTGGAAACAC TCCTCAAGCA ACACCTAGGA GTGACAAGGG CGAAGAAGCT GAAGGTGAAT GTGGTGCGAT ACGCGGATGA TTTCGTGATT ACTGGCACTT CCTCGGAAGT GCTGGAGAAC GAAGTAAAAC CTTGGGTAGA ACAGTTCCTC GCGAAGCGTG GACTGCGGTT GTCACTCAAG AAAACGCGTA TTGCTCACAT CGACGAAGGC TTCGACTTCC TTGGATGGAA TTTCCGGAAA TACGAAGGAA AGCTGCTGAT CAAACCGAGC AAAAAGAACG TTAAAGCGTT CTACGGCAAG ATCAGGGAGG CAATCAACAC CCACAAGACG AGTAAGCAAG AGGATCTAAT CCAACTGCTA AATCCGATGC TGAGGGGTTG GGCGCTATAC CATCAGCCAG TGGTAGCCAA GCAAACGTAC AGCCGGATGG ACCACCGAGT GTTTGTAAAA CTGTGGCGTT GGGCGAAACG GCGACATCCA AACAAGTCCC TCGACTGGGT TAGGAAGAAG TACTTCCGAG CCTCCGGAGA ACGGAACTGG GTTTTCGCCA CCACGACAGT GGACGATGCT GGGAGGAGAC GGGAGATCGA GCTTTGCTCG CTCGCGAGCA CGCCGATCGA GCGACACAAA AAGGTGAGTG GGGATTACAA CCCTTATGAC CCTGCCATGG AGGCCCAAAG CGAAAAACTG CGGATGGACC GGATGCTGAA AAAGCTGCAG TACCGGAAAC AAATCGGCAG CCTATACGCC AGCCAAAACG GCCTGTGTTT GCTTTGCAAG CAACCGATCA CCAAGGAAAC GGGGTGGCAC GACCACCACA TCATCCACCG GGCCGTTGAC GGTGGTGACG CCTTGGCCAA TCGGGTACTC TTGCACCCCA ACTGTCATAA CCAGCTCCAC ACGCGTGGTC TGTACGTGAC CAAGCCGGCT CCCCTTGGGG GCTTAAAGAA GGCTTGA
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Protein sequence | MKELSQQGEP ALSGTPQQWH DVDWRRVQRN VRGMQVRIAK ACREGKWRKV KSLQRMLTHS KSARYLAVRR VTENQGSRTA GVDRQLWDTP NAKWNAVGQL KTRGYRARPL RRVYIPKSDG RERPLGIPTM TDRAMQALYM LALSPIAETQ GDPNSYGFRI ERCTADAMAQ LFLCLSKQAS ACWVLDADIE GFFDNINHEW LLGNAPTDNR MLRQWLKAGV IHKGQLHATD AGTPQGGIIS PVLANLALDG LETLLKQHLG VTRAKKLKVN VVRYADDFVI TGTSSEVLEN EVKPWVEQFL AKRGLRLSLK KTRIAHIDEG FDFLGWNFRK YEGKLLIKPS KKNVKAFYGK IREAINTHKT SKQEDLIQLL NPMLRGWALY HQPVVAKQTY SRMDHRVFVK LWRWAKRRHP NKSLDWVRKK YFRASGERNW VFATTTVDDA GRRREIELCS LASTPIERHK KVSGDYNPYD PAMEAQSEKL RMDRMLKKLQ YRKQIGSLYA SQNGLCLLCK QPITKETGWH DHHIIHRAVD GGDALANRVL LHPNCHNQLH TRGLYVTKPA PLGGLKKA
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