| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0381 |
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| Symbol | |
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| ID | 6109161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 398202 |
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| End bp | 400655 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620138 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_001747256 |
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| Protein GI | 170719568 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATACGCC TGCTGAAGTT CTTCTGGTGG TCTTTCGTCG CAGTCATCTG CGCGCTCGTA
CTCGGTGTGA GCGGTGCGTT TCTGTATCTT AGCCCCAACC TGCCGTCGGT CGATTCGCTC
AGAAGCATCC AGTTGCAGAT CCCCCTGAGG GTGTACAGCA GCGATGGCAA GCTGATCGCC
GAGTTTGGCG AAATGCGCCG CTCGCCCATC CGCTTCGCGG ACATTCCCCC GCAATTCATT
CAGGCGCTTC TGTCAGCAGA GGACGACAAT TTCCTCAATC ACTACGGCGT CGACCCGGGA
AGCCTGATGC GCGCCGCGAC CCAACTGGTG AAAACCGGTC ACATACAGAC CGGCGGCAGC
ACAATCACCA TGCAGGTGGC GAAGAACTTC TTCCTCACCA GCGAGCGCAG CTTCTCGCGC
AAGACCAACG AGATTCTCCT GGCCCTGCAG ATCGAGCGCG AACTGACCAA GGACGAAATC
CTCGAGCTGT ACGTGAACAA GATCTACCTG GGCAACCGCG CCTACGGCAT CGACGCTGCC
GCACAGGTTT ACTATGGCAA GTCGATCCGT GACGTGAGCC TGGCGCAGAT GGCGATGATC
GCCGGCCTGC CCAAGGCACC GTCGCGCTTC AACCCTTTGG CCAACCCGGT GCGTGCAAAA
GAGCGTCGCG ACTGGATCCT GGGCCGCATG TACAAGCTCG GCAAGATTGA CGAGGCGAGC
TACCAGGCCG CCCTGGCCGA ACCGCTCAAC GCCAGCTACC ACGTATCGGC GCCTGAGGTT
AACGCGCCCT ACATCGCCGA GATGGCCCGT GCCGAAATGG TTGGCCGCTA TGGCAGCGAT
GCGTATACCG AGGGTTTCCG CGTCACCACC ACAGTGCCGA GCGACATGCA GGAAATCGCC
AACAAGGCCG TTCACGGTGG CCTGTCCGAT TATGATGAGC GCCACGGCTA CCGCGGCCCT
GAATCGCGCT TCCCGGGCAA AGGCCAGGCT GCCTGGCTGC AGGAATTGAA CAAGCAGCGC
ACCTTGGGCG GGCTGGAACC GGCCATCGTT ACCCAGGTTG ATAAGAGTGG CCTGAAGGTG
CTGACCCGTG GCGGCAAGGA AGAAGACGTC GCCTGGGACA CCATGAAGTG GGCGCGCCCG
TTCATCAATA GCAATGCGCA GGGCCGGGCG CCACAATCGC CGGCAGACGT AGCCCAGGTT
GGCGACCTGG TGCGCGTGCA GCGGCTGGAC GACGGCAAAC TGAAGTTCAG CCAGGTGCCG
GCAGCACAGA GTGCACTGAT TACTCTGGAC CCTTACAACG GCGCCATCCG TGCGCTGGTT
GGGGGTTTCT CGTTCGAGCA GAGCAACTAC AACCGCGCCA TGCAGGCCAA GCGCCAGCCA
GGGTCAAGCT TCAAGCCGTT CATCTATAGC GCAGCACTGG ACAGTGGCTA TACCGCCGCC
AGCCTGGTCA ACGACGCTCC GATCGTGTTC GTCGACGAGT ACCTGGACAA GGAATGGCGA
CCCAAGAATG ACACCAACAC CTTCCTCGGC CCGATTCGAA TGCGCGAAGC GCTGTACAAG
TCGCGCAACC TGGTATCGAT CCGCCTGCTG CAGGCCATGG GCGTAGGGCG TACCATCGAC
TACATCACCA AGTTCGGCTT CAACAAACAG GACCTGCCGC CCAACCTGTC GCTGGCATTG
GGCACCGCGA CCCTGACGCC AATGGAAATC GCCACCGGCT GGAGCACCTT CGCCAACGGT
GGTTACAAGA TCAACCCGTA CCTGATCGAG CGCATCGAGA GCCGCAACGG CGAGACGCTG
TTCACCGCCA ACCCTGCGCG CGTGCCGCAG GGCGCCGAAG ACGATGCGGG CCTGGCGGCA
CCAGAACAGC CGATCAGCAC GGCGTCGCTG CCAGGTGAGG CGCCGTCCGT TCCTGGCCTG
CCCGCACCCG CCACACAGGT ACCGGTAACC GCCGAGCAGA TCATTGATGG CCGTACCACC
TACATCCTCA CCAGCATGCT GCAAGACGTG ATCAAACGCG GGACCGGGCG CCGCGCCCTG
GCCCTGGGTC GTACGGACCT GGCGGGCAAG ACCGGCACCA CCAACGAGTC CAAGGATGCC
TGGTTCTCCG GCTACAACGC CGATTACGTC ACTACCGTCT GGGTCGGTTT CGACCAGCCG
GAAACCCTGG GTCGCCGCGA ATACGGCGGG ACGGCTGCCC TGCCGATCTG GATGAGCTTC
ATGGGCGCGG CCCTGAAGGA CAAGCCCAAC CACCCGCCTG CAGAACCGGA AGGCATCCTC
AGCCTGCGGG TCGACCCGGT CAGCGGTCGT GCGGCCTCTC CAAGCACGCC TAACGCCTAC
TTCGAACTGT TCAAGGCTGA AGATTCGCCA CCGTCGGTGG ATGAACTGGG CAACGGTGCA
GCGCCGGGCA GCCCGCTGCC GGCCGATGAA GCGGCGCCCA TGGATCTGTT CTGA
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| Protein sequence | MIRLLKFFWW SFVAVICALV LGVSGAFLYL SPNLPSVDSL RSIQLQIPLR VYSSDGKLIA
EFGEMRRSPI RFADIPPQFI QALLSAEDDN FLNHYGVDPG SLMRAATQLV KTGHIQTGGS
TITMQVAKNF FLTSERSFSR KTNEILLALQ IERELTKDEI LELYVNKIYL GNRAYGIDAA
AQVYYGKSIR DVSLAQMAMI AGLPKAPSRF NPLANPVRAK ERRDWILGRM YKLGKIDEAS
YQAALAEPLN ASYHVSAPEV NAPYIAEMAR AEMVGRYGSD AYTEGFRVTT TVPSDMQEIA
NKAVHGGLSD YDERHGYRGP ESRFPGKGQA AWLQELNKQR TLGGLEPAIV TQVDKSGLKV
LTRGGKEEDV AWDTMKWARP FINSNAQGRA PQSPADVAQV GDLVRVQRLD DGKLKFSQVP
AAQSALITLD PYNGAIRALV GGFSFEQSNY NRAMQAKRQP GSSFKPFIYS AALDSGYTAA
SLVNDAPIVF VDEYLDKEWR PKNDTNTFLG PIRMREALYK SRNLVSIRLL QAMGVGRTID
YITKFGFNKQ DLPPNLSLAL GTATLTPMEI ATGWSTFANG GYKINPYLIE RIESRNGETL
FTANPARVPQ GAEDDAGLAA PEQPISTASL PGEAPSVPGL PAPATQVPVT AEQIIDGRTT
YILTSMLQDV IKRGTGRRAL ALGRTDLAGK TGTTNESKDA WFSGYNADYV TTVWVGFDQP
ETLGRREYGG TAALPIWMSF MGAALKDKPN HPPAEPEGIL SLRVDPVSGR AASPSTPNAY
FELFKAEDSP PSVDELGNGA APGSPLPADE AAPMDLF
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