| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0357 |
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| Symbol | |
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| ID | 6109137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 377479 |
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| End bp | 378333 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641620114 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001747232 |
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| Protein GI | 170719544 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.108013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAT CGTTGCAACC TGCCTATGCC CTGGTTCCCG GTGCAAACCT GGAAGCCTAT
GTGCACACGG TCAACAGCAT CCCGCTGCTG ACTGTCGAGC AGGAGCGTGA TCTGGCCGAG
CGTCTCTATT ATGAGCAGGA TCTTGAGGCC GCTCGGCAAA TGGTGATGGC CCACCTGCGC
TTCGTCGTAC ATATCGCCCG TAGCTATGCT GGCTACGGAT TGGCCCAGGC CGACCTCATT
CAGGAAGGCA ACGTCGGCTT GATGAAGGCG GTCAAGCGCT TCAACCCCGA AATGGGTGTG
CGCCTGGTGT CGTTCGCTGT GCACTGGATC AAGGCTGAAA TCCACGAATT CATCCTGCGC
AACTGGCGCA TCGTCAAGGT GGCTACCACC AAGGCCCAGC GCAAGCTGTT CTTCAACCTG
CGCAGCCAGA AGAAGCGTCT GGCCTGGTTG AATAACGATG AAGTCCACCG CGTGGCTGAA
AGTCTCGGTG TCGAACCGCG AGAAGTGCGT GAGATGGAAA GCCGTCTGAG TGGCCAGGAC
ATGGCCTTCG ACCCTGCAGC GGAAGCGGAC GACGACAGCG CCTTCCAGTC GCCTGCACAT
TACTTGGAAG ACCATCGCTA CGACCCGGCT GTGCAGCTTG AAGACGCTGA CTGGAGCGAC
AACTCCACCA GCAATCTGCA TGAAGCCTTG CAGGGCCTGG ACGAGCGTAG CCGCGACATT
CTCTACCAGC GCTGGTTGGC TGAAGAAAAA GCCACGTTGC ATGAGCTGGC CGACAAGTAC
AGCGTTTCGG CTGAGCGTAT TCGTCAGCTG GAAAAGAATG CGATGAACAA GGTAAAAGCG
TTGATTGCAG CCTGA
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| Protein sequence | MTTSLQPAYA LVPGANLEAY VHTVNSIPLL TVEQERDLAE RLYYEQDLEA ARQMVMAHLR
FVVHIARSYA GYGLAQADLI QEGNVGLMKA VKRFNPEMGV RLVSFAVHWI KAEIHEFILR
NWRIVKVATT KAQRKLFFNL RSQKKRLAWL NNDEVHRVAE SLGVEPREVR EMESRLSGQD
MAFDPAAEAD DDSAFQSPAH YLEDHRYDPA VQLEDADWSD NSTSNLHEAL QGLDERSRDI
LYQRWLAEEK ATLHELADKY SVSAERIRQL EKNAMNKVKA LIAA
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