Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0312 |
Symbol | |
ID | 6109092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 326727 |
End bp | 327392 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641620069 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001747187 |
Protein GI | 170719499 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.163162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTACC AGCACCAGTA CGTAGACGGC ACCCGTATCC ACTTCCCGCT GGGCAAGGTG GTGTGCGTTG GCCGCAACTA TGCCGAGCAC GCCAAGGAAC TGGGCAATCC CATTCCGACC GAGCCGTTGC TGTTCATCAA GCCGGGCAGT TGCGTGGTGC CGCTGGAGGG TGGTTTCAAG ATTCCTACCG ACCGTGGTTC GGTGCATTAC GAAGCCGAAA TCGCGGTGTT GCTGGGCAAG CCGCTGTCGG CACATCCATC TGAAGAGGAA GTGCTGGATG CCATCTCCGG CTTTGCCCCG GCGCTGGACC TGACCCTGCG TGACGTGCAG GCTAAGCTCA AGGAAAAGGG CATGCCGTGG GAGACTTGCA AGAGCTTCGA CGGTGCCTGC GTACTGCCGC CTTTCGTCGC TGCCGGCACG TTCGAAGACC TGGCCGACAT CCCGGTGCGC CTGACCATCA ATGGTGACGT TCGCCAGGAC GGTAACAGCG CGATGATGCT CAACCCGATC GTGCCGATCA TCCAGCACAT GGCCTCGCAC TTTTCGCTGC TGCCGGGGGA TGTGATCCTG ACCGGGACCC CGGCAGGCGT CGGCCCCTTC GAAGTGGGTG ATGAGCTGGT GCTGGAGTTG CCGGGCGTCA GCCGCTTCGA AAGCCGGGTG CTCTGA
|
Protein sequence | MSYQHQYVDG TRIHFPLGKV VCVGRNYAEH AKELGNPIPT EPLLFIKPGS CVVPLEGGFK IPTDRGSVHY EAEIAVLLGK PLSAHPSEEE VLDAISGFAP ALDLTLRDVQ AKLKEKGMPW ETCKSFDGAC VLPPFVAAGT FEDLADIPVR LTINGDVRQD GNSAMMLNPI VPIIQHMASH FSLLPGDVIL TGTPAGVGPF EVGDELVLEL PGVSRFESRV L
|
| |