| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0310 |
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| Symbol | |
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| ID | 6109090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 323904 |
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| End bp | 325133 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620067 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001747185 |
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| Protein GI | 170719497 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.110897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA CTTCTCTCGA CAAGAGCAAG ATCAGGTTCC TTCTTCTTGA AGGGGTGCAC
CAGAACGCGG TGGATACCCT CAAGGCCGCC GGGTACACCA ACATTGAGTA CCTCACTGGC
TCGCTGCCGG AAGCAGAACT CAAGGAAAAG ATCGCTGATG CGCACTTCAT CGGCATCCGT
TCGCGTACCC AGCTGACCGA AGAGATCTTC GACTGTGCCA AGAAACTGGT CGCCGTCGGT
TGCTTCTGCA TCGGCACCAA CCAGGTCGAC CTGGACGCTG CACGCGAGCG CGGCATTGCC
GTGTTCAACG CGCCATACTC CAACACCCGT TCGGTGGCGG AACTGGTACT GGCCGAAGCC
ATCCTGCTGT TGCGCGGCAT CCCCGAGAAA AACGCCTCCT GCCACCGTGG CGGCTGGATC
AAGAGCGCGG CCAACTCGTT CGAAATCCGC GGCAAGAAGC TGGGCATCGT CGGCTATGGC
TCGATCGGTA CCCAGCTGTC GGTACTGGCC GAGAGCCTGG GCATGCAGGT CTACTTCTAC
GACCCGCTGA CCAAGCTGCC ACTGGGCAAC GCCGTACAAG TCACCAGCCT GCACGAACTG
CTGGGCCTGG CCGACATCGT CTCGCTGCAC GTGCCTGAGC TGCCATCCAC CCAGTGGATG
ATCGGCGAGA GAGAAATCCG CGCGATGAAG AAGGGCTCGA TCCTGATCAA CGCCGCCCGT
GGCACCGTGG TAGAACTGGA CCACCTGGCC GCAGCCATCA AGGACAAGCA CCTGATCGGC
GCCGCCATCG ACGTGTTCCC GGTCGAGCCA CGCTCCAACG ATGAAGAGTT CGAAAGCCCG
CTGCGCGGCC TGGACAACGT GATCCTCACC CCGCACATCG GCGGCTCCAC CGCCGAGGCC
CAAGCCAACA TCGGCCTGGA AGTGGCCGAG AAGCTGGTCA AGTACAGCGA CAACGGCACC
TCGGTATCGT CGGTCAACTT CCCGGAAGTC GCCCTGCCGG CGCACCCGGG CAAGCATCGC
CTGCTGCACA TCCACGAAAA CATTCCGGGC GTGCTCAGCG AGATCAACAA AGTCTTCGCC
GAGAACGGTA TCAACATCTC CGGTCAGTTC CTGCAGACCA ACGAGAAAGT GGGTTACGTG
GTAATCGACG TTGACGCCGA GTACTCGGAC CTTGCGCAAG AGAAGCTGCA GCACGTCAAG
GGCACCATCC GCTCGCGCGT ACTGTTCTGA
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| Protein sequence | MSKTSLDKSK IRFLLLEGVH QNAVDTLKAA GYTNIEYLTG SLPEAELKEK IADAHFIGIR
SRTQLTEEIF DCAKKLVAVG CFCIGTNQVD LDAARERGIA VFNAPYSNTR SVAELVLAEA
ILLLRGIPEK NASCHRGGWI KSAANSFEIR GKKLGIVGYG SIGTQLSVLA ESLGMQVYFY
DPLTKLPLGN AVQVTSLHEL LGLADIVSLH VPELPSTQWM IGEREIRAMK KGSILINAAR
GTVVELDHLA AAIKDKHLIG AAIDVFPVEP RSNDEEFESP LRGLDNVILT PHIGGSTAEA
QANIGLEVAE KLVKYSDNGT SVSSVNFPEV ALPAHPGKHR LLHIHENIPG VLSEINKVFA
ENGINISGQF LQTNEKVGYV VIDVDAEYSD LAQEKLQHVK GTIRSRVLF
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