| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0308 |
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| Symbol | |
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| ID | 6109088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 322612 |
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| End bp | 323100 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641620065 |
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| Product | periplasmic binding protein from ABC-type transporter |
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| Protein accession | YP_001747183 |
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| Protein GI | 170719495 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0940761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCGA CCATGGGTGT ACTGCTGGCA GTACTGATCA CGCCATTGGC TCAAGCCGAG
CTGATAGACG AAATCGCCGA CCGGGGCGAA CTGCGCATTG CCGTACAGGC CGACAACTCG
CCGTATGCCT TCAAGCAAAA CGACCATCTG ACGGGGTTTG AAATCGAATT CGGCCAAGAG
CTGGCCAAAC AACTGGACCT GCGTGTCGAG TTCATTGAAA CGCCTGTGGC CGAGATACTG
CCGGGTGTTG AAAGTGGCAA ATACGACATC ACTGTGACCC CATCGGACAA TGCTCCCAAG
GCCGATACGC CGTTTGATCT GAGCCAGCCT TTTGGCGAGA GGAAGCTGGT CATCCCGTTC
CAGAAAGACA ACCCGGCGTT CGAGAGTGCG GTGAACAACG CGCTGCAGCG CCTCAAGGAC
AGCGGCCGTA CAGCGGAGCT TGAGCAGAAG TGGTTCAAGG GTGTGCCGGA GACGGCTACC
GGGCAGTGA
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| Protein sequence | MRSTMGVLLA VLITPLAQAE LIDEIADRGE LRIAVQADNS PYAFKQNDHL TGFEIEFGQE
LAKQLDLRVE FIETPVAEIL PGVESGKYDI TVTPSDNAPK ADTPFDLSQP FGERKLVIPF
QKDNPAFESA VNNALQRLKD SGRTAELEQK WFKGVPETAT GQ
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