| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0306 |
|---|
| Symbol | |
|---|
| ID | 6109086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 321420 |
|---|
| End bp | 322061 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641620063 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_001747181 |
|---|
| Protein GI | 170719493 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3751] Predicted proline hydroxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0982951 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATGA TGCGCGCCAT GCATATCTCC CCTGAACACC CGATGCTTGC GGCCGTCGTT
GACGATCTGG CCTCCCATGG CTGGTCGCAG CAGGCCCTTT TCCTGCCGGC TGAGCTGGTG
CGTGCGCTTG CGGCCGAGTG TCGGCGCCGT GATGCCGAAG GCCAGCTCAA CCCTGCCGGG
GTGGGGCGCG GTGTGGCCCA GGAAGTGCGC GAGGCGATCC GTGGGGACCA GATCCAGTGG
GTCGACCCGG GGCAGGCCGA GGCTTGCGAC AAATACCTGG AAGCCATGGA CCAGCTGCGT
CTGGCAATCA ACCAGGGCCT GTTCCTTGGC CTTGAAGAGT TCGAGTGTCA CTTCGCCCTA
TACCCGCCAG GTGCGTTCTA CCGTCGCCAC CTGGACCGTT TTCGCGACGA CGACCGGCGC
ATGGTCTCGG CTGTGCTTTA CCTCAATGAA GACTGGCAGC CGCAGGATGG TGGCCAGTTG
CGCATGTTCC TGGCTGACGC TGTCGAGCAT GACGTGCAGC CCGTTGCCGG CTGTCTGGTG
GTGTTTCTAT CGGGTGAAGT GCCTCACGAA GTCTTGCCAG CGGGGCGTGA GCGGCTTTCG
TTGACGGGTT GGTTCCGGCG CCGTGGCAAT GACCCGTTCT GA
|
|---|
| Protein sequence | MDMMRAMHIS PEHPMLAAVV DDLASHGWSQ QALFLPAELV RALAAECRRR DAEGQLNPAG
VGRGVAQEVR EAIRGDQIQW VDPGQAEACD KYLEAMDQLR LAINQGLFLG LEEFECHFAL
YPPGAFYRRH LDRFRDDDRR MVSAVLYLNE DWQPQDGGQL RMFLADAVEH DVQPVAGCLV
VFLSGEVPHE VLPAGRERLS LTGWFRRRGN DPF
|
|---|
| |