Gene PputW619_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0296 
Symbol 
ID6109076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp311928 
End bp312647 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content64% 
IMG OID641620053 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001747171 
Protein GI170719483 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0686936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TGGCATCCCC CCTCGAATCC GTTGAAAGTG CAGTCATCTG GCTGCTGGTC 
GGTTTTTCCG TCGTCACCTG GGGCCTTGCC CTGGCCAAGA TCGTGCAATT CGTGCGGCTG
AAAAACCAGG ACAAGCGCTT CCACACGCAG TTCTGGGCCG CCTCAAGCCT CGACGCGGCG
GCCCAGGTCA GCCACGAACT GCCTGGCCCG GCCGCCCGCG TCGCCCAGTC CGGCTATGCC
GCCATTGCCG TCGGCGAGGC ACAGACCAAT GACCTGAGCC ATGCGATCAA TCACCAGGAC
CGCCTCGAAC GCGCCCTGCA CCAGCAGATA GTGCGGGAGC GGCGCTCGCT TGAAACCGGC
CTGGCGGTGG TGGCCAGTAT CGGCAGCACT TCGCCCTTCA TCGGCCTGTT CGGTACCGTA
TGGGGCATCA TGGAAGCACT CAAAGGCATC AGCGCGGCGG GTTCGGCCAG CCTGGAAACC
GTGGCCGGCC CTATTGGCGC TGCACTCGTA GCTACCGGTG TGGGTATCGC CGTCGCGGTG
CCGGCGGTGC TGGTCTACAA CTACTTCCTT CGTCGCCTCA AGTTGACTGC CGCTGAGCTG
GATGACTTTG CCCACGACTT CTACAGCCTG GCGCAGAAGA GTGCCTTCCG CGTGCTGGTG
CATCCTGGCG TGCAGAAGGT GCAGGCCGGC TTTACCCAGC CTGTGAAGGA GGCGTCCTGA
 
Protein sequence
MSLLASPLES VESAVIWLLV GFSVVTWGLA LAKIVQFVRL KNQDKRFHTQ FWAASSLDAA 
AQVSHELPGP AARVAQSGYA AIAVGEAQTN DLSHAINHQD RLERALHQQI VRERRSLETG
LAVVASIGST SPFIGLFGTV WGIMEALKGI SAAGSASLET VAGPIGAALV ATGVGIAVAV
PAVLVYNYFL RRLKLTAAEL DDFAHDFYSL AQKSAFRVLV HPGVQKVQAG FTQPVKEAS