Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0296 |
Symbol | |
ID | 6109076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 311928 |
End bp | 312647 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641620053 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_001747171 |
Protein GI | 170719483 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0686936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTGC TGGCATCCCC CCTCGAATCC GTTGAAAGTG CAGTCATCTG GCTGCTGGTC GGTTTTTCCG TCGTCACCTG GGGCCTTGCC CTGGCCAAGA TCGTGCAATT CGTGCGGCTG AAAAACCAGG ACAAGCGCTT CCACACGCAG TTCTGGGCCG CCTCAAGCCT CGACGCGGCG GCCCAGGTCA GCCACGAACT GCCTGGCCCG GCCGCCCGCG TCGCCCAGTC CGGCTATGCC GCCATTGCCG TCGGCGAGGC ACAGACCAAT GACCTGAGCC ATGCGATCAA TCACCAGGAC CGCCTCGAAC GCGCCCTGCA CCAGCAGATA GTGCGGGAGC GGCGCTCGCT TGAAACCGGC CTGGCGGTGG TGGCCAGTAT CGGCAGCACT TCGCCCTTCA TCGGCCTGTT CGGTACCGTA TGGGGCATCA TGGAAGCACT CAAAGGCATC AGCGCGGCGG GTTCGGCCAG CCTGGAAACC GTGGCCGGCC CTATTGGCGC TGCACTCGTA GCTACCGGTG TGGGTATCGC CGTCGCGGTG CCGGCGGTGC TGGTCTACAA CTACTTCCTT CGTCGCCTCA AGTTGACTGC CGCTGAGCTG GATGACTTTG CCCACGACTT CTACAGCCTG GCGCAGAAGA GTGCCTTCCG CGTGCTGGTG CATCCTGGCG TGCAGAAGGT GCAGGCCGGC TTTACCCAGC CTGTGAAGGA GGCGTCCTGA
|
Protein sequence | MSLLASPLES VESAVIWLLV GFSVVTWGLA LAKIVQFVRL KNQDKRFHTQ FWAASSLDAA AQVSHELPGP AARVAQSGYA AIAVGEAQTN DLSHAINHQD RLERALHQQI VRERRSLETG LAVVASIGST SPFIGLFGTV WGIMEALKGI SAAGSASLET VAGPIGAALV ATGVGIAVAV PAVLVYNYFL RRLKLTAAEL DDFAHDFYSL AQKSAFRVLV HPGVQKVQAG FTQPVKEAS
|
| |