| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0287 |
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| Symbol | |
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| ID | 6109067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 301295 |
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| End bp | 302383 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620044 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001747162 |
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| Protein GI | 170719474 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.44923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.678954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTGA CGCGTTCACT GTTGGTTGTA GGCATGGGGC TGCTTGGCCT GCTCGCAGGC
TGCAGCAAGG AAGAAGCTCC CGAGGTTTTG CCACGGGTCG GTGTATTGCA AGTTCAACCC
ACTGACTTCG CCGCCAGGGT CACCCTGACC GGTGATGTGC AGGCGCGTGT GCAGACCGAT
CTTTCGTTTC GTGTGGGTGG CAAGATCATC TCGCGCAGCG TTGACGTGGG CGATCATGTG
AAGGCCAATC AGGTGCTGGC CCGGCTGGAC CCCAAAGACC TGCAGAACAA TGTCGATTCG
GCCAAGGCCG AGGTGTTCGC CGCTCAGGCG CGTGTCACCC AGACCAGCGC CGCCTTTGTG
CGCCAGCAAA AACTGTTGCC CAAGGGCTAC ACCAGCCAGA GCGAGTACGA TTCCGCCGAA
GCCGCGCTGC GCAGCAACCA GAGCGCGCTC AAGGCAGCCC AGGCGCAACT GGCCAATGCC
CAGGAGCAAC TGAGCTACAC CGCATTGGTG TCGGAGGCTG ACGGGGTGAT CACCGAGCGC
CAGGCCGAGG TCGGGCAAGT GGTCCAGGCG ACCATGCCGA TCTTCAGCCT TGCGCGCGAT
GGCGACCGCG ATGCTGTGTT CAATGTCTAC GAGTCCCTGC TGGTGGCGCC GCCGAGCGAT
GCCGGTGTGA TGGTCAGCCT GCTCGACGAC CCTAAGGTCC AGGCCCAAGG ATTTGTTCGT
GAAATCACCC CGACCGTATC GGCACAGAGC GGCACGGTGC AGGTCAAGGT GGCCCTGCGC
AATGTGCCAG CGGCCATGCG CCTGGGTTCG CCTGTTACCG CCACGGCCAA CGCGCAGGGG
CGGCCGAGTA TCGAGTTGCC CTGGTCGGCA CTGACCAAGG CGTTGCATGA GCCTGCGGTG
TGGGTGGTGG GCGAAGGCGA CAAGGTTGAG TTGCGCAAAG TCCAGGTAAC CCGCTATCTC
ACCGGTAAAG TGGTCATCGC CCAAGGCATA AAAGGCGGTG AGACAGTAGT CGTCAGCGGT
GGCCAGTTGT TGCATCCAGG CATGCAGGTC GAGAAGATCG ATGCCAAGGG CGGAGGCGCC
GCGCCATGA
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| Protein sequence | MRVTRSLLVV GMGLLGLLAG CSKEEAPEVL PRVGVLQVQP TDFAARVTLT GDVQARVQTD
LSFRVGGKII SRSVDVGDHV KANQVLARLD PKDLQNNVDS AKAEVFAAQA RVTQTSAAFV
RQQKLLPKGY TSQSEYDSAE AALRSNQSAL KAAQAQLANA QEQLSYTALV SEADGVITER
QAEVGQVVQA TMPIFSLARD GDRDAVFNVY ESLLVAPPSD AGVMVSLLDD PKVQAQGFVR
EITPTVSAQS GTVQVKVALR NVPAAMRLGS PVTATANAQG RPSIELPWSA LTKALHEPAV
WVVGEGDKVE LRKVQVTRYL TGKVVIAQGI KGGETVVVSG GQLLHPGMQV EKIDAKGGGA
AP
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