| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0283 |
|---|
| Symbol | |
|---|
| ID | 6109063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 296872 |
|---|
| End bp | 298077 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641620040 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001747158 |
|---|
| Protein GI | 170719470 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTG ATGATTGCGG CATCGTGGCT GCGAAGGTAA GTTGCGCGCC GGTTTTGCGT
GCGTGGCAGC GCTGCGCCGT TACCAAGGCA CTGATTGTGA GGACCACCCA CTTGTCTATT
TCTGTATTAC GCAAAGCCTT GATGGCTGGA GCGGGCCTGA CGCTGGCATG CAGCGTCCAA
GCGGCGCCTA CGGTGCACTT TTATAACTGG TCCGACTACA TTGGCCCGAC CACGCTCGAA
GACTTCGAGA AAGCCACGGG TATCAAACCT GTGCAGGACG TGTTCGACTC CAACGAAACC
CTGGAAGGCA AGCTGCTGGC CGGCAACACC GGCTATGACG TGGTAGTGCC GTCTAACCAT
TTTCTCGGCA AGCAGATCAA GGCGGGCGCG TTCCAGAAGC TCGACAAGAA CCTGCTGCCC
AATTATTCCA ACCTGGACCC GGCGTTGATG AAGCGCCTGG AAAAGAACGA CCCAGGCAAC
CAGTACGCCG TGCCTTACCT GTGGGGCACC AATGGCATCG GCTACAACGT CGACAAGGTC
AAGGCGGCAC TGGGCGTGGA CACCATCGAT TCCTGGGCCG TGCTGTTCGA GCCCGAGAAC
ATGAAGAAGC TCTCCCAATG CGGCGTGGCC TTCCTGGACT CGGCGGATGA AATGCTGCCA
GCGGTGCTCA ACTATATGGG GCTGGACCCC AACAGCACCA ACCCCAAGGA CTACGAGAAG
GCCGAGCAGA AGCTGCTGGC GGTACGCCCG TACGTGACCT ACTTCCACTC GTCCAAGTAC
ATCACGGACC TGGCCAACGG CGACATCTGC GTCGCGGCAG GTTTTTCCGG CGATGTGTTC
CAGGCCAAGG CCCGCGCTGA AGAAGCGGAG AAAGGCGTGA ACCTGGCCTA CGCGATTCCC
AAGGAAGGCG GCAACCTCTG GTTCGACGTG CTGGCAGTCC CCAAGGACGC CAAGAACGTC
AAAGAGGCTC ACGCCTTCAT CAACTATTTG CTGAAACCTG AGGTTATCGC CCAGGTCAGT
GATTACGTCG GTTACGCCAA CCCGAACCCC AAGGCTGGCG ACCTGATGGA CCAGGCCGTG
AGGACTGACG CCGCGGTTTA CCCACCGCAG GAAGTGCTGG ACAAGATGTT CGTCAACAGT
GAGTTGCCAC CCAAGGTGCA ACGTTTGATG ACCCGCAGCT GGACCAAGGT CAAGTCGGGC
AAGTAA
|
|---|
| Protein sequence | MAIDDCGIVA AKVSCAPVLR AWQRCAVTKA LIVRTTHLSI SVLRKALMAG AGLTLACSVQ
AAPTVHFYNW SDYIGPTTLE DFEKATGIKP VQDVFDSNET LEGKLLAGNT GYDVVVPSNH
FLGKQIKAGA FQKLDKNLLP NYSNLDPALM KRLEKNDPGN QYAVPYLWGT NGIGYNVDKV
KAALGVDTID SWAVLFEPEN MKKLSQCGVA FLDSADEMLP AVLNYMGLDP NSTNPKDYEK
AEQKLLAVRP YVTYFHSSKY ITDLANGDIC VAAGFSGDVF QAKARAEEAE KGVNLAYAIP
KEGGNLWFDV LAVPKDAKNV KEAHAFINYL LKPEVIAQVS DYVGYANPNP KAGDLMDQAV
RTDAAVYPPQ EVLDKMFVNS ELPPKVQRLM TRSWTKVKSG K
|
|---|
| |