| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0282 |
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| Symbol | |
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| ID | 6109062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 295725 |
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| End bp | 296822 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641620039 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001747157 |
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| Protein GI | 170719469 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.443093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.882806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA TGGGCAAGAC GTTGCTGGCC GCCGCCCTGA TGGGTGCCAT GGCCACCGCT
GTACAGGCTG AAGACAAGGT GTTGAACGTC TACAACTGGT CGGACTACAT CGCTCCGGAC
ACCATCGCGA AGTTCGAAAA ACAGACAGGC ATCAAGGTCA AGTACGACGT CTTCGACAGC
AACGAAACCC TGGAAGCCAA GCTGCTGGCG GGCAAGTCCG GCTATGACGT GGTCGTACCG
TCCAACAACT TCCTGGCCAA GCAGATCAAG GCGGGGGTCT ACGAAGAGCT CGACCGCTCC
AAGCTGCCGA ACTGGAAGAA CCTCGACGAA GACCTGCTCA AGGCCGTCGG TGACGCCAGC
GACAAAGGCA ACAAGCACGC TTTCCCTTAC ATGTGGGGCT CGATCGGTAT CGGCTACAAC
CCGGAGAAGG TCAAGGCCGC GCTGGGCGTC GACAAGATCG ATTCGTGGGA CGTCGTGTTC
AAGCCTGAGA ACATCGCCAA GCTCAAGAGC TGCGGTGTGA GCTTCCTCGA CGCGCCGACC
GAAATGCTGC CGGCCGCGCT GCACTACCTG GGCCTGCCTA GCGACAGCAC CAAGAAAGAA
GACCTGAAGG CGGCCGAGGA CCTGTTCCTG AAGATTCGTC CTTCGATCAC CTACTTCCAC
TCGTCCAAAT ACATCGGCGA CATGGCCAAC GGCAACATCT GCGTGGCCGT GGGTTACTCG
GGTGACCTTG AGCAATCCAA GGCCCGCGCC CATGAAGCCG GCGACAAGGT CAAGGTCGAT
TACGTCATTC CTAAAGAAGG CGCCGGTACC TTCTACGACA TGGTCGCCAT CCCCAAGGAT
GCCGAGCACA AGGAAGCCGC CTACAAGTTC ATGGACTTCC TGATGCAGCC GGAGATCATG
GCTGAGATCA CCAACGCCGT ACGCTTCCCG AACGGTAACG CTGCTGCGAC CCCGTTCGTG
GACAAGGACA TCACCAGCGA CCCGAGCATC TATCCGCCTG CTGACGTGAA AAAGCACCTG
TACGCGATCG CCGCGCCAGA AGCTGCTGCC CAGCGCCTGA TCACCCGCAG CTGGACCAAG
ATCAAGTCGG GTAAATAA
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| Protein sequence | MKKMGKTLLA AALMGAMATA VQAEDKVLNV YNWSDYIAPD TIAKFEKQTG IKVKYDVFDS
NETLEAKLLA GKSGYDVVVP SNNFLAKQIK AGVYEELDRS KLPNWKNLDE DLLKAVGDAS
DKGNKHAFPY MWGSIGIGYN PEKVKAALGV DKIDSWDVVF KPENIAKLKS CGVSFLDAPT
EMLPAALHYL GLPSDSTKKE DLKAAEDLFL KIRPSITYFH SSKYIGDMAN GNICVAVGYS
GDLEQSKARA HEAGDKVKVD YVIPKEGAGT FYDMVAIPKD AEHKEAAYKF MDFLMQPEIM
AEITNAVRFP NGNAAATPFV DKDITSDPSI YPPADVKKHL YAIAAPEAAA QRLITRSWTK
IKSGK
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