| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0256 |
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| Symbol | hemC |
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| ID | 6109035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 268706 |
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| End bp | 269647 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641620012 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001747131 |
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| Protein GI | 170719443 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.874316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTC GCGAAATCCG CATTGCCACC CGTAAAAGTG CCTTGGCCCT GTGGCAGGCC
GAATACGTCA AAGCCCGCCT CGAGCAGGCA CATCCTGGGC TGCTGGTGAC CTTGGTGCCC
ATGGTCAGCC GCGGTGACAA GCTGCTCGAC GCGCCCCTGG CGAAAATCGG CGGCAAAGGC
CTGTTCGTCA AGGAGCTGGA AACCGCCCTG CTGGACAATG AAGCCGACAT CGCTGTGCAT
TCGATGAAGG ACGTACCCAT GGACTTCCCC GAAGGCTTGG GCCTGTACTG CATCTGTGAA
CGTGAAGACC CGCGTGACGC CTTCGTTTCC AACCGTTTTT CCAGCCTCGA TGCACTGCCT
GCCGGCAGCA TCGTCGGCAC CTCCAGCCTG CGCCGTCAGG CCCAGTTGCT GGCACGCCGC
CCTGACCTGC AAATCCGCTT CCTGCGGGGC AACGTCAACA CTCGTCTGGC CAAGCTCGAT
GCCGGTGAGT ACGACGCCAT CATCCTTGCA GCGGCGGGCC TGATCCGCTT GGGCTTTGAA
GAACGGATCA CCGCCAGCAT CAGCGTCGAC GATAGCCTGC CGGCCGGTGG CCAGGGCGCG
GTGGGCATCG AATGCCGTAG CGCAGACAGC GAGATCCATG CGCTGTTGGC GCCTTTGCAT
CACACTGATA CCGCTGACCG TGTGGTGGCC GAACGAGCGT TGAACAAGCA CTTGAACGGC
GGCTGCCAGG TACCGATTGC CTGTTATGCC GTGCTCGAAG GCGAGCAGCT ATGGCTGCGC
GGCCTGGTTG GCCAGCCCAG CGGTGGGACC CTGTTGATGG CTGACGCCCG TGCACCGCGG
GCATCGGCCG AAACGTTGGG GGTACAGGTG GCCGAAGACC TGCTGGGCCA AGGTGCTGCG
GCCATTCTCA AGGAAGTCTA CGGTGAGGCC GGGCACCCGT GA
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| Protein sequence | MSTREIRIAT RKSALALWQA EYVKARLEQA HPGLLVTLVP MVSRGDKLLD APLAKIGGKG
LFVKELETAL LDNEADIAVH SMKDVPMDFP EGLGLYCICE REDPRDAFVS NRFSSLDALP
AGSIVGTSSL RRQAQLLARR PDLQIRFLRG NVNTRLAKLD AGEYDAIILA AAGLIRLGFE
ERITASISVD DSLPAGGQGA VGIECRSADS EIHALLAPLH HTDTADRVVA ERALNKHLNG
GCQVPIACYA VLEGEQLWLR GLVGQPSGGT LLMADARAPR ASAETLGVQV AEDLLGQGAA
AILKEVYGEA GHP
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