| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0242 |
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| Symbol | xerC |
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| ID | 6109021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 256290 |
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| End bp | 257189 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641619998 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001747117 |
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| Protein GI | 170719429 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.322874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.826572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCC AGCTGGAGGC TTATTGCGCC CACCTGCGCA ACGAGCGCCA GGTGTCCGAA
CACACGCTGC TGGCCTACCG CCGCGACCTC GAAAAGGTCA TCGAATACTG CAACACCCAA
GGCATCGCGG GCTGGGGCGC CTTGCAGATC CAGCAACTGC GCCAACTGAT CGCCCGCCAG
CATCATCAGG GGCAATCCTC GCGCAGCCTG GCGCGGCTAC TGTCGGCGGT ACGCGGGCTG
TATCGCTACC TGAACCGTGA AGGCCTCTGC CAGCACGATC CCGCCAGCGG CCTGAGCGCC
CCCAAGGGCG AGCGCCGGCT GCCCAAGGTG CTGGACACCG ACCGTGCCCT GCAACTGCTC
GACGGCGGCG TGGACGACGA CTTCATCGCC CGCCGCGACC AGGCCATCCT CGAACTGTTC
TATTCCTCTG GCCTGCGCCT GTCCGAGCTG ACCAACCTCG ACCTTGAGCA CCTGGACCTT
GCTGCCGGCC TGGTACAGGT GCTCGGCAAA GGTGGCAAGG CGCGCGTGCT GCCTGTCGGC
CGCAAAGCGC GCGAAGCCAT GCAGCAATGG TTGCGGCTGC GCGGCATCGG CGGCCCGCGT
GACGGCGCCG TCTTCATCAG CCGTCAAGGC AATCGCCTTG GGCCACGGGC TATCCAGATG
CGGGTCAAGG CAGCCGGTGA ACGCGAACTG GGCCAGCACC TGCACCCGCA CATGCTTCGC
CATTCATTCG CCAGCCATGT GCTGGAATCG TCCCAGGACC TGCGGGCGGT GCAGGAAATG
CTCGGCCATG CCGACATCAG CACCACACAG ATCTACACCC ACCTGGACTT CCAGCACCTG
GCGGCGGTGT ACGACAGCGC CCACCCACGG GCCAAACGCA GCAAAGGCAC AGACTCATGA
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| Protein sequence | MERQLEAYCA HLRNERQVSE HTLLAYRRDL EKVIEYCNTQ GIAGWGALQI QQLRQLIARQ
HHQGQSSRSL ARLLSAVRGL YRYLNREGLC QHDPASGLSA PKGERRLPKV LDTDRALQLL
DGGVDDDFIA RRDQAILELF YSSGLRLSEL TNLDLEHLDL AAGLVQVLGK GGKARVLPVG
RKAREAMQQW LRLRGIGGPR DGAVFISRQG NRLGPRAIQM RVKAAGEREL GQHLHPHMLR
HSFASHVLES SQDLRAVQEM LGHADISTTQ IYTHLDFQHL AAVYDSAHPR AKRSKGTDS
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