Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0239 |
Symbol | |
ID | 6109018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 253424 |
End bp | 254758 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641619995 |
Product | ammonium transporter |
Protein accession | YP_001747114 |
Protein GI | 170719426 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.050651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.714996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGC GTAAGATCGC AGGGCTAGGA GCCCTATTGT CCCTCGTAAT GCCGGGCATC GCCCTGGCAG AGGAGGCTGC CGCCCCAGTA CTGAACTCAG GTGACACCGC CTGGATGCTG ACTGCCACGG CGCTGGTGCT GTTCATGACC ATCCCGGGCC TGGCCCTGTT CTACGGCGGT ATGGTGCGTT CGAAGAACGT ACTTTCGGTG ATGATGCAAT GCTTTGCCAT CACCGGTCTG ATGAGCATTC TCTGGGTCGT TTACGGCTAC AGCATGGCCT TCGATACCAC CGGTATGGAA AAGGGCGTGC TCAACTTCAA TTCCTTCGTC GGCGGCTTCT CCAAGGCGTT CCTCAGCGGC GTCACTCCGG ACGGCCTGAC GTCGGCTGCC GCACTGTTCC CTGAAGCGGT CTTCATTACC TTCCAGATGA CCTTCGCCAT CATCACCCCG GCGCTGATCG TGGGTGCCTT CGCCGAACGC ATGAAGTTCT CGGCAATGCT GGTGTTCATG GGCATCTGGT TCACCTTGGT CTACGCACCG ATCGCGCACA TGGTCTGGAG CGGTGATGGC GCGCTGATGT GGGACTGGGG CGTGCTCGAC TTCGCTGGCG GCACCGTGGT GCACATCAAC GCAGGTATCG CCGGCCTGGT CTGCTGCCTG GTATTGGGCA AGCGCAAAGG CTACCCGACT ACCCCGATGG CCCCGCACAA CCTGGGCTAC ACCCTGATGG GCGCAGCCAT GCTGTGGATC GGTTGGTTCG GCTTCAACGC CGGCTCCGCC GCAGCCGCCA ACGGCACTGC CGGCATGGCC ATGCTGGTGA CCCAGATCGC CACCGCTGCT GCAGCGTTGG GCTGGATGTT CGCCGAGTGG ATCGGCCACG GCAAACCTAG CGCCCTGGGC ATCGCCTCGG GTGTGGTCGC CGGCCTGGTT GCCATCACCC CTGCTGCCGG CACCGTGGGC CCGATGGGCG CCCTGGTGAT TGGCCTGGTG TCTGGCGTGC TCTGCTACTT CTGCGCTACC ACCCTCAAGC GCAAGCTGGG TTATGACGAC TCCCTGGATG CCTTCGGCGT GCATGGCATC GGCGGCATCA TCGGCGCCAT CCTCACCGGT GTGTTCGCGG CTCCGGCCCT GGGCGGCTTC GGCGCGGTCA CCGATATCGG TGCGCAGGTC TGGATCCAGG CCAAGGGCGT GATTTTCACC GTGGTCTACA CCGCCATCGT CACCTACGTG ATCCTCAAGG TGCTGGACGT GGTGATGGGC TTGCGGGTCA ACGAAGAAGA AGAGTCGGTC GGCCTCGACC TGGCTCAACA CAACGAACGC GGTTACAACC TGTAA
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Protein sequence | MTLRKIAGLG ALLSLVMPGI ALAEEAAAPV LNSGDTAWML TATALVLFMT IPGLALFYGG MVRSKNVLSV MMQCFAITGL MSILWVVYGY SMAFDTTGME KGVLNFNSFV GGFSKAFLSG VTPDGLTSAA ALFPEAVFIT FQMTFAIITP ALIVGAFAER MKFSAMLVFM GIWFTLVYAP IAHMVWSGDG ALMWDWGVLD FAGGTVVHIN AGIAGLVCCL VLGKRKGYPT TPMAPHNLGY TLMGAAMLWI GWFGFNAGSA AAANGTAGMA MLVTQIATAA AALGWMFAEW IGHGKPSALG IASGVVAGLV AITPAAGTVG PMGALVIGLV SGVLCYFCAT TLKRKLGYDD SLDAFGVHGI GGIIGAILTG VFAAPALGGF GAVTDIGAQV WIQAKGVIFT VVYTAIVTYV ILKVLDVVMG LRVNEEEESV GLDLAQHNER GYNL
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