| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0230 |
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| Symbol | |
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| ID | 6109009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 239829 |
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| End bp | 244886 |
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| Gene Length | 5058 bp |
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| Protein Length | 1685 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641619986 |
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| Product | ATPase domain-containing protein |
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| Protein accession | YP_001747105 |
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| Protein GI | 170719417 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.59916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.455487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATG AACGCCTTGT GCAAAGGCCC GTCGATTACG CTCAGTCTAT CGACGACGGC
TGGTTGAGCC GGTGTGACAT CACGCAACTG GACCAGGAAG GTGACCTCAC CTACTTCCGC
CTGCACGACC CCGTCACACG CCTGGCCTGG CTCGCCGTGC GCGCCCCGGT CGAAGCTCCA
GCCGCCTGCC AACGCCTGGA GCGCGACTAC CGTCTGCACC TTGACCCTGA GTGGGCGGTT
CTCCCTTCGG CCTTTCTGCG CTCCGCCGAA GGCCCATTGC TGGTATACCC GGCCGGCCGT
TCGATCGCTG ACCTCATCGC CCAAGGCCCT GCCGCGCTTG CGCCCTTTCT CCGCGTTGCG
GTAAACGCTG CGCGGGCCCT GGCGCAGGCA CATGAGCACA ATGTGCTGCA TGGAGCCTTG
CAACCGGAAC ACATCTGCAT CGGGCAAGCG CTACGTGTTC GGCTTGGTTG CTTTCGCGCC
GACACTCAAG TGCAGGGCAG CCCGCAGCAA ATGGCGATCG GCAACTGGTC CTATCTGGCA
CCAGAGCAGC TCTGCGCCCA TGGCACCAGC CGCGATCAGC GCAGCGACAT CTATGCCTTG
GGCGCGATCC TCTACCAGTT GCTGCTGGGC GAGCTGCCCT TGAGCGGGCG CGACACGCTG
CACTGGCGCC AGCTGCATGC CGGCGTGCAA CCGCGGGCAG CCAACGAAGT CGACGCCAGG
GTGCCGCTGG CGCTCAGCGA CATCCTCGCC AAAGCGCTGG CCAAAGAGCC TGAAGCCCGC
TACCAGAGCG CACGTGCCCT GGCCATCGAC CTTGACCACT GTCAACGGCA GTGGGCCGCC
TCACAGGCCA TCGAAGGCTT TGAACCGGGC AGCGCGGACG GTATCGCGCC CAGCCGCGAA
CGCCTGTACG GTCGCGATGC CGAACAGAAG GTGATCGCTC TGCTGATGAA AGCCTTGCGC
CGTGACAGCA CACCGCAAGC GCTGTTCGTC AGTGGTGCCA CCGGCATGGG CAAGTCACGC
CTGGTCGAAA CGGCGCTGAA GGCCGGCGCC GACGGTTATT GGGCCATCGG GAAATGCAAC
AGCCTCGAAC AGGCAGTGCC CTACGCGCCC TGGATCGAAA TTCTGCAGTC GCTGGCCACG
CAGTTGCTGG CGAAAAACAG CCAAGACCTC GAAACGCTGC GCCGCGAGAT CCTGCGTCGG
CTAAAAGGCC GCGGCCGACT GCTGGGCAAG CTGGCTCCTG ACCTCAACCT GATCATCGGC
CCACTGCCCG AACTGCCGGA AAAACCTACG CGGTCGGCAC TGCAGAAGGA GCTACGGGCC
ATCGTCGAGT TCCTCCACGT GTTCAGCCGG CCCGGCCACC CGCTGGCGCT ATTCCTGGAT
GACATGCAGT GGGCTGACGA TGGCACACAG CACTTGCTGG CGGAGCTGTT CGCCAAGCCG
CCGGGTAACC TTTTGCTGAT TTTCGCCCGG CGCAACGATG CGCACCCCAG CAGCAATGCC
TTCACGCCTG CTGCCGCTGT GCGCAGTACC ACCTTGAACC TGCGCCCGCT TACCGTGAGC
GCAGTGACAG AGCTTATTGG CGAGCGATAC CACGTGCAGC CGGAGGCGGC TTTGGAGGTT
GCGCAGCTGG TGCACGACAA GACCGCGGGC AACCCGTTTT TCATCAACCA GATTCTCACT
GCGATGGTCG AGGATGGGCT GTTTACGTTC GACACCCAAG CCATGCGCTG GTCATGGTCA
CTGGACGCGG TGGCGCGCCA CCGTTATGCC GATAACGTCG CCGACCTGAT GGTCCAACGC
ATGGCCCGCC TGCCCGCTGT CCAGCGCGAT GTGCTGCGCA TTGCCAGCGC CGTGGGCAAC
CGCTGCGATG AGCGGTTGCT CGAGCGCATC CTGGCGCTGC CTGCAGGGCT ACCCGCCGAA
TCGCTCAAAG CACTGACTGC CGCAGGCTTC CTTCTGCCTG GGCAGAGGGG CCTTGGTTTC
GCCCATGACC GTGTGCAGGA CGCCGCCTAC GAACTCACGC CGATGCGTGA ACGGGCACAG
TTGCATGCGC GGATCGCGCA GGCCATGCAG CTTACATGGC AAGACGATCT GCAAGATGCC
GTCTTCGATA TCGCCAACCA GCTACAACGC GCCAGCCCGA AAGCGTTCGA AACGAATGAC
TGCGAGGCCT TCCTGCCATT ACTGCACGAG GCCGCCCTGC GTGCGCGCGA CAGTGGCGCC
GTTGACCAGG CGGCCGCCTA CCTGCACACC GCCGACCATG TGCTACGCGT CAGCGCGACA
CCCTCAGCCC ATGCCGAACA CGCCTTCAGC ATCGCCTGCA TGGCAGCGGA GTGCGACATG
CAGCTGTCAC GCATGCCGCA GGCTGAGGCC CGCCTCGCCG ATTGCCAGAA CCGGGCGAGA
ACGGCCCTTG ACCAGGCACG GGTATGCAGG CTACAGGCAC GCCTACATAC CTTGCGCTGC
GACTACCAAG CGGCCATCAG CGCAGCGGTC TACGGCCTTG AGCTACTGGG CATCACACTG
GACCGCGGAA GCAATCAGGC CCAGGTCGAG GCCAGCTTTG CCCATGTGCA GGCCCTGATC
GAGCGCAAAG GCCGCCACTG CCTGGAGTCA CTGCCACGTT GCAATGCGCA GGAAGTGACG
GTTGCCGTGG GCCTGCTGGC GACCCTTTCA TCATCTTTTT TCGTCCAGGA CGATATCTGT
TTCCTGCACT TGGCCAAGCT CATGGAATTG TCCCTGAGCC AGGGTGTTGC GCCAGGCAGC
ACGTATGGGC TCGCCTGGTA CGGCGTGATG ATCGCCGAGC GCTTCGGTGC CTACCACGAT
GGGCATGCCT GCTGCCTGGC GGCGCTGAAA CTGATCGAGC GTCACGGCTT CGAGGCAGAC
CTGACCAGCG CGCTGCTTGC CCTGGACCAG GTCAGCGCCT GGACCGCACC CATGGAATTC
GCCCGGCGCA CTGCCCTGGA GGCTATTGAT TCAGGCCGCC TGAGCGGCGA CCTGGCAATG
AGTTGCTATG CCAGCAATCA CTTGGTCTCG GACTCGCTGT TCATGGGGCG CTACCTGCCG
GAAGTAGCCG ATGAGGTGGC ACAGGGCCTG GCCACCGTGC GCAGGTACAG CTACAGCGAC
ATTGAACATA TCCTGTTGGC CCAGCAAGCA TTCGTCGCCG ACCTGTGTGG CAACGCCTTC
TCAGGCTCGA CCGCAGGGGT GAAATCACGA ACGACTCTGT TCTTCAAACA CCTGTTCAGC
GGCATGTCGG CCTTCTATCT GGGCAACATC AAGCAGGCCA TACACAGCCT CGCCTGTGCT
GGCGAGCATG CCTGGGCGGC ACCCGCGCAC ATCAACCTGG CGGACTACCA CCTGTTTCAT
GGCCTGGCTC TGGGCAGCCC GGAAGCACCT GGCAGCCTTG CCAGTAAACT GGCCGCGCTG
CAGGCAGTGC GCGTGCGCTT TGCCAGCTGG GCCAACTTCA ACCCGGTTAC CTTCCGCAAC
AAGCTGCTGT TGATAGAAGG GGTCATCGCC AAACTCAATG GCGACGGCAT GGCCGCCATC
CGCTGCTTCG ATCAGGCGCA GATCGCCGCC ACTGCGGCCG GTTTCATTCA TGAACAGGCT
CTGGCTCATG AACAACTGGC CGAGGTGTGC ATCCCCAACG GGTTGATCTC TGGCGCCAAC
CTGCACCTGC GCATTGCCCG CGACTGTTTT CATATCTGGG GCGCGACAGG CAAAGTACGC
CAACTCGAGA CACTGCACCC GTTCCTGCGC ACCCAGCCGG TACAGGAAAC CCACCGTTCT
TCCAGCCAGG CGCGGCTGGA CCTGGAAGCG GGTATCGAAG CTGCGCGGGC GCTGTCCGAA
GAGGTGTTGC TCGAAGGCCT CATCGAGACG CTTATGGGCC ACCTGACCCA GCACTCCGGT
GCCGATCACG GCGCACTGCT GATCGTCAGT GGCGCCGAGT TCCAGATGGC TGCCCTGGCC
TATATCGATG ATGTCGGCCT GCATGTGCGC ATGGACAACT GCCAGAAATT CCTCACCCAG
GCCCCGCTGT CGATCATCAA CGCCACCATG CGCACCAAGA AACCGCTGGT GCTCAACGAT
GCCCTGAGCG AATGCCCGGA AGCCTTCCGC CAGGAGCTGC AGGCGCGTAA TGCGCGCTCG
GTACTGTGCC TGCCACTGGT TATTCAGGGT GTGCTGATTG GCCTGGTCTA CCTGGAGAAC
CGCCTGGTGC CGAACCTGTT CGGCGGCCAG CGCCTGGCCA TGCTGGAGAT TCTGGCATCA
CAAGCGGCGG TGTCGCTGCA GACAGCAAAG TTCTATACCC GTCTGGCAGA AGACAACCAG
ACTCGCGCGC AGATGGAAGC CGAACTGCGC CGTTCACGTG CGCAGCTTGC CAGCAGTGCG
CACCAGCAGG TGATGAACGA GCTTTCGGCA TCCATCGCCC ACGAGATCAG CCAGCCGCTT
CTGGGTATCG CCTCCAATGC CGCAGCCAGC CTGCGCTGGC TCAAGCGCGA AACGCCCGAT
CTGAAGGAAG CCATTGCCGG CCTCGAAGAC ATTCGCAACG ACAGCGAGCG CGCAGCCAAC
ATCGTGCGGG CACTGCGTTC GCTGGCCAAA CAAACGCCGA TGCAACTCAA GACGGTGAAG
CTGGACGAAC TGATTCTGGA AGTAGTGCGG CTGACCTCTG GCGATGCCGG CAAATGCAAG
GTGGATGTGC AGACCCGGCT GCATGCAGCG GTAAGCGTGA TGGCTGACCC GGTGCAGTTG
CAGCAGTTGG TGTTCAACCT CATCACCAAT GCGCTGGAGG CGCTGGCGGG CTATCGCAGT
GATGGGCGGC TGCAGATTTC ATCCGAGGTG CTGGCAGACA AAGTGGAGAT CTGCGTCGAC
GATAACGGCC CGGGCATCGC TCCAGAGGAG CGGGATCAGG TCTTCGGGGC GTTCTACACG
ACCAAGAGCG GCGGTTTGGG GATGGGCCTG GCGATCTGCA ATTCGGTGGT ACAGGCCCAT
GGAGGGCAGT TGCAGGCGCA GGTTTCGGCG CTTGGTGGGT GCAGGATTCG GCTTACCATC
CCGGTGCAGC AGGTCTGA
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| Protein sequence | MLDERLVQRP VDYAQSIDDG WLSRCDITQL DQEGDLTYFR LHDPVTRLAW LAVRAPVEAP
AACQRLERDY RLHLDPEWAV LPSAFLRSAE GPLLVYPAGR SIADLIAQGP AALAPFLRVA
VNAARALAQA HEHNVLHGAL QPEHICIGQA LRVRLGCFRA DTQVQGSPQQ MAIGNWSYLA
PEQLCAHGTS RDQRSDIYAL GAILYQLLLG ELPLSGRDTL HWRQLHAGVQ PRAANEVDAR
VPLALSDILA KALAKEPEAR YQSARALAID LDHCQRQWAA SQAIEGFEPG SADGIAPSRE
RLYGRDAEQK VIALLMKALR RDSTPQALFV SGATGMGKSR LVETALKAGA DGYWAIGKCN
SLEQAVPYAP WIEILQSLAT QLLAKNSQDL ETLRREILRR LKGRGRLLGK LAPDLNLIIG
PLPELPEKPT RSALQKELRA IVEFLHVFSR PGHPLALFLD DMQWADDGTQ HLLAELFAKP
PGNLLLIFAR RNDAHPSSNA FTPAAAVRST TLNLRPLTVS AVTELIGERY HVQPEAALEV
AQLVHDKTAG NPFFINQILT AMVEDGLFTF DTQAMRWSWS LDAVARHRYA DNVADLMVQR
MARLPAVQRD VLRIASAVGN RCDERLLERI LALPAGLPAE SLKALTAAGF LLPGQRGLGF
AHDRVQDAAY ELTPMRERAQ LHARIAQAMQ LTWQDDLQDA VFDIANQLQR ASPKAFETND
CEAFLPLLHE AALRARDSGA VDQAAAYLHT ADHVLRVSAT PSAHAEHAFS IACMAAECDM
QLSRMPQAEA RLADCQNRAR TALDQARVCR LQARLHTLRC DYQAAISAAV YGLELLGITL
DRGSNQAQVE ASFAHVQALI ERKGRHCLES LPRCNAQEVT VAVGLLATLS SSFFVQDDIC
FLHLAKLMEL SLSQGVAPGS TYGLAWYGVM IAERFGAYHD GHACCLAALK LIERHGFEAD
LTSALLALDQ VSAWTAPMEF ARRTALEAID SGRLSGDLAM SCYASNHLVS DSLFMGRYLP
EVADEVAQGL ATVRRYSYSD IEHILLAQQA FVADLCGNAF SGSTAGVKSR TTLFFKHLFS
GMSAFYLGNI KQAIHSLACA GEHAWAAPAH INLADYHLFH GLALGSPEAP GSLASKLAAL
QAVRVRFASW ANFNPVTFRN KLLLIEGVIA KLNGDGMAAI RCFDQAQIAA TAAGFIHEQA
LAHEQLAEVC IPNGLISGAN LHLRIARDCF HIWGATGKVR QLETLHPFLR TQPVQETHRS
SSQARLDLEA GIEAARALSE EVLLEGLIET LMGHLTQHSG ADHGALLIVS GAEFQMAALA
YIDDVGLHVR MDNCQKFLTQ APLSIINATM RTKKPLVLND ALSECPEAFR QELQARNARS
VLCLPLVIQG VLIGLVYLEN RLVPNLFGGQ RLAMLEILAS QAAVSLQTAK FYTRLAEDNQ
TRAQMEAELR RSRAQLASSA HQQVMNELSA SIAHEISQPL LGIASNAAAS LRWLKRETPD
LKEAIAGLED IRNDSERAAN IVRALRSLAK QTPMQLKTVK LDELILEVVR LTSGDAGKCK
VDVQTRLHAA VSVMADPVQL QQLVFNLITN ALEALAGYRS DGRLQISSEV LADKVEICVD
DNGPGIAPEE RDQVFGAFYT TKSGGLGMGL AICNSVVQAH GGQLQAQVSA LGGCRIRLTI
PVQQV
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