Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0228 |
Symbol | |
ID | 6109007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 238698 |
End bp | 239069 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641619984 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001747103 |
Protein GI | 170719415 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.654381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCTG GCACGCCCGA AGACAACCCT CATTCCCCCG GTGCCCTGAC CCCCGCGCGG TTACGCCAGG CCAAGGAACT GATGCTGCGC AGCTCGCTGT CGATCATTGA GATCGCAGGG GTGTGCAACC TCACCCGTAG CCATTTCTCC CGTGCCTTCA AGGTCAACAC CGGCCTTTCG CCCCAGGCCT GGCGACTGCT GGCGCGGATG GAGAAGGCCA AGCGCCTGTT GGCCACCGAG GCGCCTATCA CCCATGTGAG CCTGGAGTGC GGTTTTTGCG ACCAGGCCCA TTTCACTCGC GCCTTCAGCC GCTTGGTCGG CCAACCGCCC AAGGCCTGGC GCCAGGCAGC GCGCATCGAC GCACATCCTT AA
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Protein sequence | MNPGTPEDNP HSPGALTPAR LRQAKELMLR SSLSIIEIAG VCNLTRSHFS RAFKVNTGLS PQAWRLLARM EKAKRLLATE APITHVSLEC GFCDQAHFTR AFSRLVGQPP KAWRQAARID AHP
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