Gene PputW619_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_0228 
Symbol 
ID6109007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp238698 
End bp239069 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content65% 
IMG OID641619984 
ProductAraC family transcriptional regulator 
Protein accessionYP_001747103 
Protein GI170719415 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.654381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTG GCACGCCCGA AGACAACCCT CATTCCCCCG GTGCCCTGAC CCCCGCGCGG 
TTACGCCAGG CCAAGGAACT GATGCTGCGC AGCTCGCTGT CGATCATTGA GATCGCAGGG
GTGTGCAACC TCACCCGTAG CCATTTCTCC CGTGCCTTCA AGGTCAACAC CGGCCTTTCG
CCCCAGGCCT GGCGACTGCT GGCGCGGATG GAGAAGGCCA AGCGCCTGTT GGCCACCGAG
GCGCCTATCA CCCATGTGAG CCTGGAGTGC GGTTTTTGCG ACCAGGCCCA TTTCACTCGC
GCCTTCAGCC GCTTGGTCGG CCAACCGCCC AAGGCCTGGC GCCAGGCAGC GCGCATCGAC
GCACATCCTT AA
 
Protein sequence
MNPGTPEDNP HSPGALTPAR LRQAKELMLR SSLSIIEIAG VCNLTRSHFS RAFKVNTGLS 
PQAWRLLARM EKAKRLLATE APITHVSLEC GFCDQAHFTR AFSRLVGQPP KAWRQAARID
AHP