| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0218 |
|---|
| Symbol | |
|---|
| ID | 6108997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 227732 |
|---|
| End bp | 228361 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641619974 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_001747093 |
|---|
| Protein GI | 170719405 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.562325 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACT TCAAATACAA CCGCCTGAAC AAAGACGACG CCGCTGTTCT GCTGGTCGAC
CACCAGGCTG GTCTGCTGTC CCTGGTTCGC GACATCGAGC CGGATGCGTT CAAGAACAAC
GTGCTGGCCC TGGCTGACCT GGCCAAGTTC TTCAACCTGC CGACCATCCT CACCACCAGC
TTCGAACAAG GCCCTAACGG CCCGTTGGTA CCAGAACTCA AAGCACTGTT CCCGGACGCC
CCGTACATCG CCCGCCCTGG CCAGATCAAC GCCTGGGACA ACGAAGACTT CGTCAAGGCA
GTGAAGGCCA CCGGCAAGAA GCAGCTGATC ATCGCCGGTG TAGTGACCGA GGTGTGTGTG
GCGTTCCCGG CGCTGTCGGC ACTGGAAGAA GAGTTCGAGG TGTTCGTGGT GACCGATGCC
TCCGGCACCT TCAATGCCAT GACCCGCGAC GCCGCCCACG ACCGCATGAG CCAGGCTGGC
GCACAGCTGA TGACCTGGTT CGGCGTGGCA TGTGAGCTGC ATCGCGACTG GCGCAACGAC
GTCGAAGGCC TGGCCGCGCT GTGCTCCAAC CACATCCCGG ATTACCGCAA CCTGATGACC
AGCTACAACG CCTTCAACGC CGGCAAGTAA
|
|---|
| Protein sequence | MTNFKYNRLN KDDAAVLLVD HQAGLLSLVR DIEPDAFKNN VLALADLAKF FNLPTILTTS
FEQGPNGPLV PELKALFPDA PYIARPGQIN AWDNEDFVKA VKATGKKQLI IAGVVTEVCV
AFPALSALEE EFEVFVVTDA SGTFNAMTRD AAHDRMSQAG AQLMTWFGVA CELHRDWRND
VEGLAALCSN HIPDYRNLMT SYNAFNAGK
|
|---|
| |