| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0206 |
|---|
| Symbol | |
|---|
| ID | 6108985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 210272 |
|---|
| End bp | 212281 |
|---|
| Gene Length | 2010 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641619962 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_001747081 |
|---|
| Protein GI | 170719393 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0188843 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAC TCAATCCCAG GCAACAGGAA GCCCGTGACT ACGTCGGCGG CCCTCTTTTG
GTGCTCGCCG GTGCAGGCTC CGGCAAGACC AGCGTGATTA CGCGCAAGAT TGCCCACCTG
ATCCAGAACT GCGGCATCCG TGCCCAGTAC ATCGTCGCGA TGACCTTCAC CAACAAGGCC
GCGCGCGAGA TGAAGGAACG GGTCGCCACC CTGCTGCGCC CGGGGGAAGG CCGGGGCCTG
ACGGTATGTA CCTTCCACAA CCTGGGCCTG AACATCATCC GCAAGGAGCA CGACAAGCTG
GGCTACAAGC CGGGCTTTTC GATCTTCGAC GAATCCGACA TCAAGGCGCT GCTGTCGGAC
ATCATGCAGA AAGAATATTC CGGCGACGAC GGCATCGACG AGATCAAGAA CATGATCGGT
GCCTGGAAGA ACGACCTGAT CCTGCCCGCC GAAGCCCTGG AAAAAGCGCG CAACCCGCGC
GAGCAGACCG CCGCCATTGT CTATACCCAC TACCAGCGCA CGCTCAAGGC GTTCAACGCG
GTGGACTTCG ACGACCTGAT CCTGCAGCCG GTCAAGCTGT TCCAGGAGCA CCCCGAAGTG
CTGGAGCGCT GGCAGAACCG CGTGCGCTAC CTGCTGGTGG ACGAATACCA GGACACCAAC
GCCAGCCAGT ACCTGCTGGT GAAAATGCTG ATCGGCATGC GCAACCAGTT CACAGTAGTG
GGTGACGATG ACCAGTCGAT CTACGCCTGG CGTGGTGCGC GCCCCGAGAA CCTGATGCTG
CTCAAGGAAG ATTACCCTTC CCTGAAAATC GTCATGCTCG AACAGAACTA CCGCTCCACC
AGCCGCATCC TGCGCTGCGC CAACGTGCTG ATCGCCAACA ATCCGCATGC GTTCGAGAAG
CAGCTGTGGA GCGAGATGGG CGTGGGCGAC GAAATCCGTG TGATCCGCTG CAAGAACGAG
GAAGCCGAGG CCGAGCGTGT GGCCATGGAA ATCCTCACCT TGCACCTGCG CACCAACCGC
CCTTACAGCG ACTTCGCCAT CCTCTACCGC GGCAACTACC AGGCCAAGCT GATCGAGCTG
AAACTGCAGC ATCACCAGGT ACCGTATCGC CTGTCGGGCG GCAACAGCTT CTTCGGCCGT
CAGGAGGTCA AGGACCTGAT GGCCTACCTG CGCTTGCTGG TGAACCCGGA CGACGATAAC
GCCTACCTGC GGGTGATCAA CGTACCGCGC CGCGAGATCG GCTCGACCAC CCTGGAAAAG
CTCGGCAACT ACGCCACCGA ACGGGGCGTC TCGATGTATG CCGCCAGCGA GGAGCTGGGC
CTGGGCGAGC ATCTGGACGC GCGTTATACC GAGCGTCTGC AGCGTTTCAA GCACTGGCTC
GACGGCGTGC GCCACAAAGT CGCCCTGGAA GACCCGATTG CCGCGCTGCA CGAGATGATC
CGCGACATCG ACTACGAAAA CTGGATCCGC CAGCAGACGG CCAGCGACAA GGCTGCGGAA
TTTCGCATCA GCAACGTCTG GTTCCTGGTC GAAGCGCTGA AGAACACCCT CGAGAAGGAC
GAAGAGGGTG ACATGACCAT CGAGGACGCC ATCGGCAAGC TGGTGCTGCG CGACATGCTC
GAGCGCCAGC AGGAAGAGGA AGAAAACGCC GAGGGGGTGC AAATGATGAC CCTGCACGCG
TCCAAAGGCC TGGAATTCCC TTACGTGTTC ATCATGGGCA TGGAGGAGGA AATCCTCCCC
CACCGCTCGA GCATCGAAGC CGACACCATC GAAGAGGAAC GCCGCCTGGC CTACGTGGGC
ATTACCCGCG CCCGCCAGAC CCTGGCCTTC ACCTTCGCTG CCAAACGCAA GCAGTACGGC
GAAATCATCG ACTGCACGCC CAGCCGGTTC CTCGACGAAC TGCCGCCGGA CGACCTGGCC
TGGGAAGGCC TGGACGATGC GCCAGTGGAA GTCAAAGCCG CGCGTGGCAA CAACGCACTG
GCCGATATCC GGGCAATGCT CAAACGCTGA
|
|---|
| Protein sequence | MSRLNPRQQE ARDYVGGPLL VLAGAGSGKT SVITRKIAHL IQNCGIRAQY IVAMTFTNKA
AREMKERVAT LLRPGEGRGL TVCTFHNLGL NIIRKEHDKL GYKPGFSIFD ESDIKALLSD
IMQKEYSGDD GIDEIKNMIG AWKNDLILPA EALEKARNPR EQTAAIVYTH YQRTLKAFNA
VDFDDLILQP VKLFQEHPEV LERWQNRVRY LLVDEYQDTN ASQYLLVKML IGMRNQFTVV
GDDDQSIYAW RGARPENLML LKEDYPSLKI VMLEQNYRST SRILRCANVL IANNPHAFEK
QLWSEMGVGD EIRVIRCKNE EAEAERVAME ILTLHLRTNR PYSDFAILYR GNYQAKLIEL
KLQHHQVPYR LSGGNSFFGR QEVKDLMAYL RLLVNPDDDN AYLRVINVPR REIGSTTLEK
LGNYATERGV SMYAASEELG LGEHLDARYT ERLQRFKHWL DGVRHKVALE DPIAALHEMI
RDIDYENWIR QQTASDKAAE FRISNVWFLV EALKNTLEKD EEGDMTIEDA IGKLVLRDML
ERQQEEEENA EGVQMMTLHA SKGLEFPYVF IMGMEEEILP HRSSIEADTI EEERRLAYVG
ITRARQTLAF TFAAKRKQYG EIIDCTPSRF LDELPPDDLA WEGLDDAPVE VKAARGNNAL
ADIRAMLKR
|
|---|
| |