| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0202 |
|---|
| Symbol | |
|---|
| ID | 6108981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 206436 |
|---|
| End bp | 206984 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641619958 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001747077 |
|---|
| Protein GI | 170719389 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1396] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.614203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00167713 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGACGTCG GCGAACGACT GCAAGCCATC CGCAAGCTCA AGGGCCTGTC CCAGCGTGAA
CTCGCCAAGC GTGCGGGCGT GACCAACAGC ACCATCTCGA TGATCGAGAA GAACAGTGTG
AGCCCCTCTA TCAGCTCGCT GCGCAAGGTG CTAAGCGGCA TTCCAATGTC CATGGTCGAG
TTTTTCTCCG TGGAACTGGA AGCGGAAAGC CACGCCCAGA TTGTGTACAA GGCCCATGAA
CTGATCGACA TTTCCGACGG TGCAGTGACG ATGAAGCTGG TGGGCAAGTC GCATCCCAAC
CGTGCCATTG CCTTCCTTAC CGAGGTCTAT CCGCCGGGTG CCGACACCGG AGCGGAGATG
CTCACCCACG ATGGCGAAGA GACCGGCATC CTCCTTGAAG GCCGCCTGGA ACTGGTGGTT
GGCACCGAGA CCTTCGTCCT CGAAGAAGGT GACAGCTACT ATTTCGAGAG CACCCGCCCG
CACCGTTTCC GCAACCCTTT CGATGAGCCG GCCCGGCTGA TCAGCGCTGC AACGCCGTCG
AACTTTTGA
|
|---|
| Protein sequence | MDVGERLQAI RKLKGLSQRE LAKRAGVTNS TISMIEKNSV SPSISSLRKV LSGIPMSMVE
FFSVELEAES HAQIVYKAHE LIDISDGAVT MKLVGKSHPN RAIAFLTEVY PPGADTGAEM
LTHDGEETGI LLEGRLELVV GTETFVLEEG DSYYFESTRP HRFRNPFDEP ARLISAATPS
NF
|
|---|
| |