| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0187 |
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| Symbol | |
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| ID | 6108966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 191835 |
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| End bp | 193424 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641619943 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001747062 |
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| Protein GI | 170719374 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000120375 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTGCCG CCGCCCTTTC CTTAATGCTC ACCTCCCTGT TTGCTGCCGG CATCGCCCAG
GCCGCACCAC TGAGCGTCTG CAGCGAAGCC AGCCCCGAGG GCTTCGACGT GGTCCAGTAC
AACTCGCTGA CCACCACCAA CGCCTCGGCC GACGTACTGA TGAACCGCCT GGTCGAGTTC
GACGCAGGCC AAGGCAAGGT CATCCCCAGC CTGGCGCAGA GCTGGACAGT GTCGGCTGAC
GGCCTGGTGT ACGACTTCAA GCTGCGTGAA GGGGTCAAAT TCCACTCCAC GCCTTATTTC
AAGCCAACCC GCGCGCTCGA TGCCGACGAT GTGCTGTTCA GCTTCCAGCG TATGCTCTAC
CCCGCCCACG CCTGGCACAA GACCGCACCG GGTGGCTACC CGCACGCCCA ATCACTGCAA
CTGGGCAGCC TGATCAAGTC GATCGAGGCG CCGGAGCCGA ACAGCGTACG CTTCACCCTG
ACCCACGCCG ACGCCACTTT CCTGGCCACC TTGAGCATGG GCTTTGCTTC GATCTACTCC
GCCGAGTACG CCGACAAACT GCTCAAGGCA GGCACCCCGC AGAAGCTCAA TAGCCAGCCG
ATCGGCACCG GCCCGTTCGT CTTCCAGCGC TACCAGAAGG ACGCCGTGGT GCGCTACCGC
GCCAACCCTG ACTACTTCGA TGGCAAGCCT GCAGTCGATC CGCTGATCTT CGCCATCACC
ACCGATGCCA ACGTACGCCT GCAGAAGCTC AAGCGTGGTG AATGCCAGGT GGCCCTGTCG
CCCAAGCCCC TGGACGTTAC CGAAGCGGGC AAGGACGGTA ACCTCAAGGT CGCCACGACG
CCGGCCTTCA TGACGGCCTT CGTTGCCATC AACAGCGAGC ACCCGCCGCT GGACAAACCC
GAGGTACGCC AAGCGATCAA CCTGGCCTTC GACAAGCAGG CCTACCTCAA GGCCGTTTTC
GAAGGCACCG CCACTGCCGC CAACGGCCCT TACCCGCCCA ACACCTGGAG CTATGCCAAG
GACCTGCCCG GCTACCCGCT GGATCTCAAG CGAGCCAAAG CGCTGCTGAG CAAGGCCGGT
TACCCAGAGG GGTTGAGCAC CACGATCTGG ACCCGCCCGT CGGGCAGCCT GCTCAACCCC
AACCCAAGCC TGGGCGCGCA GATGCTGCAG GCAGACCTGG CCAAGATCGG CATCAAGGCC
GAAATCCGCG TCATCGAATG GGGTGAGCTG ATCCGTCGAG CCAAGGCTGG CGAGCATGAC
CTGCTGTTCA TGGGCTGGGC CGGCGACAAC GGCGACCCGG ACAACTTCCT AAGCCCGCAG
TTTTCTTGTG CGGCGGTCAA GTCGGGGACC AACTTCGCGC GGTTCTGCGA CAGCCGGCTG
GACCAGTTGA TCAGTGCAGG GCGTACCACC AACGACCAGA GCGTGCGCAG CCGGTTGTAC
CAGCAGGCGC AGACGCTGAT TCAGCAGCAG GCGCTGTGGG TGCCGCTGGC GCACCCGATG
GCGGCAGCGC TGTTGCGCGA GGGAGTCGAG GGTTACCAGG TAAGCCCGTT CGGGCGGTTG
GATTTCAGCA AGGTTTCGGT GAAGCGCTGA
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| Protein sequence | MRAAALSLML TSLFAAGIAQ AAPLSVCSEA SPEGFDVVQY NSLTTTNASA DVLMNRLVEF
DAGQGKVIPS LAQSWTVSAD GLVYDFKLRE GVKFHSTPYF KPTRALDADD VLFSFQRMLY
PAHAWHKTAP GGYPHAQSLQ LGSLIKSIEA PEPNSVRFTL THADATFLAT LSMGFASIYS
AEYADKLLKA GTPQKLNSQP IGTGPFVFQR YQKDAVVRYR ANPDYFDGKP AVDPLIFAIT
TDANVRLQKL KRGECQVALS PKPLDVTEAG KDGNLKVATT PAFMTAFVAI NSEHPPLDKP
EVRQAINLAF DKQAYLKAVF EGTATAANGP YPPNTWSYAK DLPGYPLDLK RAKALLSKAG
YPEGLSTTIW TRPSGSLLNP NPSLGAQMLQ ADLAKIGIKA EIRVIEWGEL IRRAKAGEHD
LLFMGWAGDN GDPDNFLSPQ FSCAAVKSGT NFARFCDSRL DQLISAGRTT NDQSVRSRLY
QQAQTLIQQQ ALWVPLAHPM AAALLREGVE GYQVSPFGRL DFSKVSVKR
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