| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0182 |
|---|
| Symbol | |
|---|
| ID | 6108961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 186836 |
|---|
| End bp | 187741 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641619938 |
|---|
| Product | acetylglutamate kinase |
|---|
| Protein accession | YP_001747057 |
|---|
| Protein GI | 170719369 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0548] Acetylglutamate kinase |
|---|
| TIGRFAM ID | [TIGR00761] acetylglutamate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0306646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000000157401 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCG ATCGCGATGC CGCTTCCCAT GTAGCCGAGG TTTTGTCCGA AGCACTGCCT
TACATTCGCC GTTTTGTCGG CAAGACCCTG GTGATCAAGT ACGGCGGCAA CGCGATGGAG
AGCGAAGAGC TCAAGACCGG GTTTGCCCGT GACATCGTGC TGATGAAGGC CGTGGGCATC
AACCCGGTGG TCGTGCACGG CGGTGGCCCT CAGATCGGCG ACCTGCTCAA GCGCCTGTCG
ATCGAAAGCC ACTTCATCGA CGGCATGCGC GTCACCGACG CGGCCACCAT GGACGTCGTT
GAAATGGTAC TTGGCGGCCA GGTCAACAAG GACATCGTCA ACCTGATCAA CCGCCACGGC
GGCAGCGCCA TCGGCCTGAC CGGCAAGGAC GCAGAGCTGA TCCGCGCCAA GAAGCTCACC
GTGAGCCGCC AGACGCCGGA GATGACCCAA CCGGAAATCA TCGACATCGG CCACGTCGGC
GAAGTGGTCA GCGTCAACAC CGACCTGTTG AACATGCTGG TCAAAGGCGA CTTCATTCCG
GTGATCGCGC CAATCGGCGT GGGCGCCAAC GGTGAGTCGT ACAACATCAA CGCCGACCTG
GTGGCCGGCA AGGTGGCCGA AGCACTGAAA GCCGAGAAGC TGATGCTGCT GACCAACATC
GCTGGCCTGA TGGACAAGCA AGGCCAGGTC CTGACCGGCC TGACTACCGA GCAGGTGAAC
GAACTGATCG CCGACGGCAC CATCTACGGC GGCATGCTGC CGAAGATCAA GTGCGCGCTG
GAAGCCGTCC AGGGTGGCGT GAACAGCTCG CACATCATCG ATGGCCGCGT GCCGAATGCG
GTGCTGCTGG AGATCTTCAC CGACAGCGGC GTGGGCACCT TGATCACCAA CCGCAAGCCA
CGCTGA
|
|---|
| Protein sequence | MTLDRDAASH VAEVLSEALP YIRRFVGKTL VIKYGGNAME SEELKTGFAR DIVLMKAVGI
NPVVVHGGGP QIGDLLKRLS IESHFIDGMR VTDAATMDVV EMVLGGQVNK DIVNLINRHG
GSAIGLTGKD AELIRAKKLT VSRQTPEMTQ PEIIDIGHVG EVVSVNTDLL NMLVKGDFIP
VIAPIGVGAN GESYNINADL VAGKVAEALK AEKLMLLTNI AGLMDKQGQV LTGLTTEQVN
ELIADGTIYG GMLPKIKCAL EAVQGGVNSS HIIDGRVPNA VLLEIFTDSG VGTLITNRKP
R
|
|---|
| |