| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0181 |
|---|
| Symbol | pyrE |
|---|
| ID | 6108960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 186114 |
|---|
| End bp | 186755 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641619937 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_001747056 |
|---|
| Protein GI | 170719368 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0223943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00000686039 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCGT ATCAGCGCGA CTTCATCCGT TTTGCCATCG ATCGCGGCGT TCTGCGCTTC
GGTGAATTCA CCCTGAAATC GGGGCGTACA AGCCCGTATT TCTTCAATGC CGGCCTGTTC
AACACAGGTT CTGCCCTGGC TCAGTTGGGG CGTTGCTATG CGGCGGCCAT CGTCGACAGC
AAGATCCCGT TCGACGTACT GTTCGGCCCG GCCTACAAGG GTATCCCCCT GGCAGCGGCC
ACCGCCGTGG CCCTGGCCGA GCAACATCAG CTGGACGTGC CGTGGTGCTT CAACCGCAAG
GAAGCCAAGG ATCACGGCGA AGGCGGCAGC CTGGTCGGCG CGCCACTGGC CGGTGACGTC
CTGATCATCG ATGACGTGAT CACCGCTGGC ACTGCCATCC GCGAGGTCAT GCAGATCATC
AATGCCCAGC AGGCCAAGGC CGCTGGCGTG CTGATCGCGC TCAACCGCGA AGAGCGCGGC
AATGGCGAAC TGTCGGCGAT CCAGGAAGTG GAGCGTGACT TCGGTATCCC AGTAGTCAGC
ATCGTTTCGC TGACCCAGGT GCTGGAGTTC CTGGCCGATG ATCCGCAGCT CAAGCAGCAT
CTGCCGGCGG TCGAAGCCTA TCGGGCGCAG TACGGTATCT GA
|
|---|
| Protein sequence | MQPYQRDFIR FAIDRGVLRF GEFTLKSGRT SPYFFNAGLF NTGSALAQLG RCYAAAIVDS
KIPFDVLFGP AYKGIPLAAA TAVALAEQHQ LDVPWCFNRK EAKDHGEGGS LVGAPLAGDV
LIIDDVITAG TAIREVMQII NAQQAKAAGV LIALNREERG NGELSAIQEV ERDFGIPVVS
IVSLTQVLEF LADDPQLKQH LPAVEAYRAQ YGI
|
|---|
| |