| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0173 |
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| Symbol | |
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| ID | 6108952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 177787 |
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| End bp | 178659 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641619929 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001747048 |
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| Protein GI | 170719360 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00130123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATATC AGATCACCCA CGCCGACCTC TCCCTGGTGC TGGCCCTGGA GCGCGGGCGC
TCACTGGCCA AGGCCGCCGA ACTGCTCAAG GTCGATGTTT CGACCGTGTT CCGTTCGATT
CGCCGGCTTG AGTCGGCACT GGGCACCGCA CTGTTCGTCA AGAGCCGCAA AGGCTACCTG
CCGACCGACA CCGCCCAGGC CCTGGCCGAG CAGGCCGAAC GTGCCGAGCA GGCTCTGGAT
GCTGCGCGCA TCGCCATGAC CAGTGGCGAG CAAGTGGTGA GCGGTACCGT TCGTCTGACG
TGCACAGAGG CGGTGATGCA CAGCCTGCTA CTGCCGGCAC TGGCCGAGTT CATGCCCAAT
TACCCGGCAC TGTCGCTGGA GATGGGCACG TCCAACACCT TCGCCAACCT CAGCAGGCGC
GATGCCGACA TCGCCCTGCG CCTGACCAAT ACCCCGCCCG AGCATCTGGT CGGCCGTTGC
CTGGGTTCGA CGTCCTATGT GATCTGCGGC CAGCCGCAAT GGCGCGAGCG CCTGAGCGAG
TCCCACAACA GCGTGCCATG GATAGCACCG GACGACTCCA TGCAGGACCA CCCCACGGTG
GTCTGGCGTA ATCAGCAGTA CCCCGGGCTG AGCCCGCGCT ACCAGTGCAG CAGCATGTCG
ACCATTGCGC AGCTGGTAAG CACGGGGCTG GGTGTTGCGG CGCTGCCCGA CTACATGGTC
CATGCGCTAC CTGGCGTCGA GGCGCTGAGC GGACCGCTGG CCGCTTGCGA CACCCAACTG
TGGCTGCTGA CCCGGCCCGA TTGCCGGGCC TTGCGCTCGG TGCAGACATT GTTCGAAGAG
CTGACCCCAA GGTTGCGCGG CGCGATGTTG TGA
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| Protein sequence | MQYQITHADL SLVLALERGR SLAKAAELLK VDVSTVFRSI RRLESALGTA LFVKSRKGYL
PTDTAQALAE QAERAEQALD AARIAMTSGE QVVSGTVRLT CTEAVMHSLL LPALAEFMPN
YPALSLEMGT SNTFANLSRR DADIALRLTN TPPEHLVGRC LGSTSYVICG QPQWRERLSE
SHNSVPWIAP DDSMQDHPTV VWRNQQYPGL SPRYQCSSMS TIAQLVSTGL GVAALPDYMV
HALPGVEALS GPLAACDTQL WLLTRPDCRA LRSVQTLFEE LTPRLRGAML
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