| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0171 |
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| Symbol | |
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| ID | 6108950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 175152 |
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| End bp | 177260 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641619927 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001747046 |
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| Protein GI | 170719358 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0270237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGCA TAGAAGCCTT AGCCGAACGG CTGTCGACCT ACCTGGGCCC CGAACAGGTC
AACCTGGTTC GCCGGGCCTA TTTCTACGCC GAACAGGCAC ACGATGGGCA ACGCCGCCGC
AGCGGCGAGC CCTATGTGAC CCATCCGTTG GCCGTGGCCA GCATCCTCGC CGACATGCAC
ATGGACCATC AGAGCCTGAT GGCGGCCATG CTGCACGATG TGATCGAAGA CACCGGCATC
GCCAAGGAAG CCCTCAGCCA GCAGTTTGGC GAAACGGTTG CCGAGCTGGT CGATGGGGTC
AGCAAACTGA CCCAGATGAA CTTCGAGACC AAGGCCGAAG CGCAGGCTGA AAACTTCCAG
AAGATGGCCA TGGCCATGGC CCGCGATATC CGCGTGATCC TGGTCAAGCT GGCTGACCGC
CTGCACAACA TGCGCACCCT GGAAGTGCTG TCTGGCGAAA AACGCCGACG CATCGCCAAG
GAAACCCTGG AAATCTACGC GCCCATCGCC AACCGGCTGG GCATGCACAC TGTGCGCGTA
GAGTTTGAAG ACCTCGGCTT CAAGGCCATG CACCCGATGC GCTCGTCGCT GATCCACCGG
GCGGTCAAGA GCGCACGCGG CAACCGCAAA GAGATCGTCG CCAAGATCGA ACACTCGCTG
GCCAACTGCC TGGCTGCCGA TGGTATTCAA GGCGAGGTCA GCGGCCGGCA GAAACACCTC
TATGGCATCT ACAAGAAGAT GCGCGGCAAG CGCCGCGCCT TCACCGAGAT CATGGACGTG
TACGCCTTCC GCATCATCGT CGACAAGGTC GACACCTGCT ACCGCGTGCT CGGCGCCGTG
CACAACCTGT ACAAGCCGCT GCCCGGGCGC TTCAAGGACT ACATTGCGAT CCCCAAGGCC
AACGGCTATC AGTCGTTGCA CACCACGCTG TTCGGCATGC ACGGCGTGCC CATCGAAATC
CAGATCCGCA CCCGCGAAAT GGAAGAGATG GCCAACAATG GCATCGCCGC ACACTGGCTG
TACAAGTCCA ACGACGACGA GCAGCCCAAA GGCAACCATG CGCGCGCTCG CCAGTGGGTC
AAGGGCATCC TCGAACTGCA GCAGCGTGCC GGCAACTCGC TGGAATTCAT CGAGAGCGTG
AAGATCGACC TGTTCCCTGA CGAGGTCTAT GTCTTCACGC CCAAAGGCAG GATCATGGAG
CTGCCCAAAG GCTCCACCGC CGTCGATTTC GCCTATGCGG TGCATACCGA TGTGGGCAAT
AGCTGCATCG CCTGCCGCAT CAACCGGCGC CTGGCGCCCC TGTCCGAGCC GCTGCAGAGC
GGTTCGACGG TCGAGATCGT CAGCGCCCCG GGCGCGCGGC CCAACCCGGC CTGGCTCAAC
TTCGTGGTCA CCGGCAAGGC CCGTACGCAC ATCCGCCACG CACTCAAGCA GCAGCGACGT
TCCGAGTCGA TCAACCTTGG CGAGCGCCTG CTGAACAAGG TGCTGACCGG TTTCGACAGC
AGCCTGGAGC AAATTCCTCA GGAGCGTATC AACGCAATTC TCGCCGAGTA CCGCCTGGAG
CTGATCGAGG ACCTGCTCGA AGACATTGGC CTGGGCAACC GCATGGCCTA TGTGGTGGCC
CGCCGCCTGC TGTCAGCCGA AGGCGAACCG CTGCCAGCAC CGGAAGGCCC ACTGGCGATC
CGCGGCACCG AAGGCCTGGT ATTGAGCTAC GCCAAGTGCT GCACGCCCAT TCCGGGCGAC
CCGATTGTCG GCCATCTGTC GGCAGGCAAG GGCATGGTCG TGCACCTGGA GAACTGCCGC
AACATCAGTG AAATCCGCCA TAACCCGGAG AAGTGCGTAC AGCTTTCCTG GGCCAAGGAC
ATCACCGGCG AATTCAATGT CGAGTTGCGT GTCGAGCTGG AACACCAGCG CGGCCTGATT
GCCCTGCTGG CCAGCAGCGT CAATGCCGCA GACGGCAACA TCGAGAAGAT CAGCATGGAC
GAACGCGACG GCCGCATCAG CGTTGTCCAA CTGGTGGTCA GCGTGCACGA CCGCGTGCAC
CTGGCTCGTG TGATCAAGAA GCTGCGTACG CTGACCGGCG TGGTCCGCAT CACCCGCATG
CGTGCGTAG
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| Protein sequence | MPGIEALAER LSTYLGPEQV NLVRRAYFYA EQAHDGQRRR SGEPYVTHPL AVASILADMH
MDHQSLMAAM LHDVIEDTGI AKEALSQQFG ETVAELVDGV SKLTQMNFET KAEAQAENFQ
KMAMAMARDI RVILVKLADR LHNMRTLEVL SGEKRRRIAK ETLEIYAPIA NRLGMHTVRV
EFEDLGFKAM HPMRSSLIHR AVKSARGNRK EIVAKIEHSL ANCLAADGIQ GEVSGRQKHL
YGIYKKMRGK RRAFTEIMDV YAFRIIVDKV DTCYRVLGAV HNLYKPLPGR FKDYIAIPKA
NGYQSLHTTL FGMHGVPIEI QIRTREMEEM ANNGIAAHWL YKSNDDEQPK GNHARARQWV
KGILELQQRA GNSLEFIESV KIDLFPDEVY VFTPKGRIME LPKGSTAVDF AYAVHTDVGN
SCIACRINRR LAPLSEPLQS GSTVEIVSAP GARPNPAWLN FVVTGKARTH IRHALKQQRR
SESINLGERL LNKVLTGFDS SLEQIPQERI NAILAEYRLE LIEDLLEDIG LGNRMAYVVA
RRLLSAEGEP LPAPEGPLAI RGTEGLVLSY AKCCTPIPGD PIVGHLSAGK GMVVHLENCR
NISEIRHNPE KCVQLSWAKD ITGEFNVELR VELEHQRGLI ALLASSVNAA DGNIEKISMD
ERDGRISVVQ LVVSVHDRVH LARVIKKLRT LTGVVRITRM RA
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