| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0168 |
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| Symbol | |
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| ID | 6108947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 173035 |
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| End bp | 173892 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641619924 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001747043 |
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| Protein GI | 170719355 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0296892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC GTTCCGTATT GATCGTAGGT TGTGGTGATG TCGGCGGCCG GCTGGCTCGC
CAATTGCTCG CCCGTGGCTG GCAGGTAAGC GGCCTGCGCC GTTCGGTCGA ACACCTGCCA
CAGCGTGTTG TACCGATCGC TGCCGACCTG TCCGATTCGG GCATGCCCCA GGCTTGGCCG
CAGCATTCCC CGGATTATCT GGTGTATTGC GTAGCCGCCA GCCAGCACGA TGAGGCGGGT
TATCAAAGCG CTTACGTTGA AGGCTTGCGT CACGTGCTGG GTTGGCTGGC CGAGCGCGGA
CAGCGCCCGC GCCGCCTGCT GTTCGTGTCC AGCAGCAGTG TTTTTGCACA AAAGGATGGG
GAGTGGATCG ATGAGACCGC ACCTACCGAG CCGCAAGGCT ATTCGGGGCG TGTGATGCTG
GAGGCTGAGC GGCTGGCCCT GGCCAGCGGC ATGCCGGCAA GCATCGTGCG CCTGACAGGG
ATCTATGGCC CAGGGCGTGA GTGGCTCCTC AGCCAGGTGC GTCAGGGCTA TCGGGTGGCG
ACCGAGCCGC CGCTGTATGG CAACCGTATT CATGCCGAGG ATGCCGCAAG CCTGCTGGCG
TTCCTGCTGC AGGCCGATGC CGATGGTGTG GCGTTGGACG ATTGCTATAT AGGCGTTGAC
GACGACCCTG CGCCGCTGGC CGATGTGGTT GGCTGGTTGC GAGCGTACAT GGGCGTGACC
GAATGGTCCG ATGAGCAGCG GGTGCGCCGC ACCGGCAGCA AGCGCTGCAG CAATGCCCGG
GTGCGGGCAT TGGGTTGGGT ACCGGAGTAT CCGAGTTACA AGGAAGGGTA CGCGGCGATC
CTGAAAGGTG AAGGCTGA
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| Protein sequence | MSDRSVLIVG CGDVGGRLAR QLLARGWQVS GLRRSVEHLP QRVVPIAADL SDSGMPQAWP
QHSPDYLVYC VAASQHDEAG YQSAYVEGLR HVLGWLAERG QRPRRLLFVS SSSVFAQKDG
EWIDETAPTE PQGYSGRVML EAERLALASG MPASIVRLTG IYGPGREWLL SQVRQGYRVA
TEPPLYGNRI HAEDAASLLA FLLQADADGV ALDDCYIGVD DDPAPLADVV GWLRAYMGVT
EWSDEQRVRR TGSKRCSNAR VRALGWVPEY PSYKEGYAAI LKGEG
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