| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0167 |
|---|
| Symbol | |
|---|
| ID | 6108946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 171872 |
|---|
| End bp | 172843 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641619923 |
|---|
| Product | tonB-system energizer ExbB |
|---|
| Protein accession | YP_001747042 |
|---|
| Protein GI | 170719354 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.115924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGTA CTCACACTTC CGCTTCGCCA ACCCCGTCAC GCGCCTGGCG CGCCATTGCC
GCGCTGATGT TCAGCCTGGT GCTGGCCCCA GTAGCCATGG CCGATGAGCC CAATACCAAC
GTCAGTACCC CTGCAGCTGC AAGCGCGCCG GCCACCCCTG CCGCCGAAGG CCAGGCACCT
GCTGGCGACG CTCAGGTCGC AACGCCGGTC GATGCGCCGG CGGCAGCGGC CCCAAGCACC
GAAGCCGTGG TCGAGAACAC TTCGCTGGGC ATGGCCCATG ACCTGTCCCC ATGGGGCATG
TACAAGAACG CCGACGTTGT TGTGAAAGCG GTCATGATCG GTCTGGCCAT TGCCTCGATC
ATCACCTGGA CCATCTGGAT CGCCAAGGGC TTCGAGCTGA TGGGCGCCAA GCGTCGCCTG
CGCGGCGAAA TCGCACAGCT GAAGAAGTCT GCCAGCCTCA AGGAGGCCAG CGAAGTCTCC
AACAAGGAAG GCACCCTGGC CCACACGCTG GTCCACGATG CTTTGGAAGA AATGCGCCTG
TCGGCAAACG CCCGTGAAAA AGAGGGCATC AAGGAACGCG TGAGCTTCCG CCTGGAGCGT
CTGGTGCATG CCAGCGGACG CAACATGAGC AGCGGCACCG GCGTGCTCGC CACCATCGGG
TCCACCGCGC CGTTCGTCGG CCTGTTCGGT ACCGTGTGGG GCATCATGAA CAGCTTCATC
GGCATCGCCA AAACACAGAC CACCAACCTG GCCGTCGTTG CCCCCGGTAT CGCCGAAGCC
CTGCTGGCCA CCGCCCTGGG CCTGGTCGCA GCGATCCCGG CCGTAGTTAT CTACAACGTC
TTCGCCCGCT CCATCGCCGG CTACAAAGCT CAGGTTTCCG ATGCTTCGGC GCAGGTTCTG
CTGCTGGTCA GCCGTGACCT GGACCACCAG GGTGGCGAGC GCGTCGCCCC GCACATGGTG
AAAGTGGGGT AA
|
|---|
| Protein sequence | MTRTHTSASP TPSRAWRAIA ALMFSLVLAP VAMADEPNTN VSTPAAASAP ATPAAEGQAP
AGDAQVATPV DAPAAAAPST EAVVENTSLG MAHDLSPWGM YKNADVVVKA VMIGLAIASI
ITWTIWIAKG FELMGAKRRL RGEIAQLKKS ASLKEASEVS NKEGTLAHTL VHDALEEMRL
SANAREKEGI KERVSFRLER LVHASGRNMS SGTGVLATIG STAPFVGLFG TVWGIMNSFI
GIAKTQTTNL AVVAPGIAEA LLATALGLVA AIPAVVIYNV FARSIAGYKA QVSDASAQVL
LLVSRDLDHQ GGERVAPHMV KVG
|
|---|
| |