| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0166 |
|---|
| Symbol | |
|---|
| ID | 6108945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 171440 |
|---|
| End bp | 171868 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641619922 |
|---|
| Product | biopolymer transport protein ExbD |
|---|
| Protein accession | YP_001747041 |
|---|
| Protein GI | 170719353 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0981914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTGC ATCTCAACGA AGGTGGCGAC GACCTCGCCG AAAACCACGA AATCAACGTC
ACGCCGTTCA TCGACGTGAT GCTGGTACTG CTGATCATCT TCATGGTGGC CGCGCCCCTG
GCCACGGTCG ACATCAAGGT CGACCTGCCG GCTTCGACTG CCAAGCCGGC ACCGAGGCCG
GAAAAACCGG TGTTCGTCAG CGTCAAGGCC GACCAGAAGC TGTATGTCGG TGACGATCAG
GTGCCTGCAC CCAGCCAGCT TGGCCCGATG CTCGACGCCA AGACCAAGGG CGACAAGGAA
ACCACCATCT TCTTCCAGGC CGACAAAGGC GTGGATTACG GTGACCTGAT GGAAGTGATG
AACAACATGC GCGCGGCCGG CTACCTCAAA GTCGGTCTGG TAGGTCTCGA GACGGCAGCC
AAGAAATGA
|
|---|
| Protein sequence | MGLHLNEGGD DLAENHEINV TPFIDVMLVL LIIFMVAAPL ATVDIKVDLP ASTAKPAPRP
EKPVFVSVKA DQKLYVGDDQ VPAPSQLGPM LDAKTKGDKE TTIFFQADKG VDYGDLMEVM
NNMRAAGYLK VGLVGLETAA KK
|
|---|
| |