| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0165 |
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| Symbol | |
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| ID | 6108944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 170709 |
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| End bp | 171443 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641619921 |
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| Product | TonB family protein |
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| Protein accession | YP_001747040 |
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| Protein GI | 170719352 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.107992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA CGCGGCACAA TCTGGCGCGT TACAGCGGCA GCCTGGCACT TGTGCTGGGT
GTCCATGCCG TCGCTGTGCT GCTCACGCTC AACTGGTCGG TGCCCCAGGC CGTCGAGCTG
CCCCCGGCAG CCATGATGGT TGAACTGGCA CCGCTGCCCG AGCCCGCACC GCCACCACCA
CCGAAGGCCG CTCCACAGCC GCCGGCACCG GTCGAAGAGC CGCCGTTGCC CAAGGTGGCT
GAAGCGCCCA AACCAAAGAT CGCCATCGCC AAGCCGCCCA AGCCCAAACC CAAGCCTCAA
CCGCCGAAGC CTGAGAAAAA GCCTGAGCCG CCGAAGGATG AGCCACCGGC CAAAGAACAG
GTCGTGGACA CCCCACCAAC CAACACGCCA CCGCAGAAGT CGGCGGCACC GGCACCAAGT
ATTGCAGCGA ACAGCAAAGC GTTGCCTACG TGGCAGAGTG ATCTGCTGCG CCACCTGGCG
AAGTACAAGC GCTACCCGGA GGACGCACGT CGCCGGGGCC TTCAGGGCAT CAACCGCCTG
CGCTTCGTGG TCGATGCTGA AGGCAAAGTG GTCTCGTACT CCATGGCAGG AGGTTCGGGC
AGCGCAGCAC TGGACCGGGC AACCCTGGAA ATGATCCGCC GGGCCGGCAA AGTGCCCAAG
CCGCCTGCGG AATTGCTGAA CAATGGCACG ATTGAAGTCG TAGCACCGTT CGTCTACTCG
CTGGACCGTC GCTGA
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| Protein sequence | MTKTRHNLAR YSGSLALVLG VHAVAVLLTL NWSVPQAVEL PPAAMMVELA PLPEPAPPPP
PKAAPQPPAP VEEPPLPKVA EAPKPKIAIA KPPKPKPKPQ PPKPEKKPEP PKDEPPAKEQ
VVDTPPTNTP PQKSAAPAPS IAANSKALPT WQSDLLRHLA KYKRYPEDAR RRGLQGINRL
RFVVDAEGKV VSYSMAGGSG SAALDRATLE MIRRAGKVPK PPAELLNNGT IEVVAPFVYS
LDRR
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